Building a DCA Frustratometer from scratch. Ultimately we aim to compare frustrated sites according to the DCA and AWSEM Frustratometers.
☆17Jan 8, 2026Updated 9 months ago
Alternatives and similar repositories for Frustratometer
Users that are interested in Frustratometer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is a repo used for CTBP tech talks☆13Nov 12, 2025Updated 11 months ago
- ☆16Apr 3, 2025Updated last year
- ☆41Mar 25, 2026Updated 7 months ago
- An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM☆39May 28, 2025Updated last year
- ☆19Oct 2, 2026Updated 3 weeks ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions☆17Jun 18, 2026Updated 4 months ago
- Open-source, commercially permissive implementation of the Germinal antibody design pipeline☆19Oct 17, 2026Updated last week
- Pseudo Likelihood Maximization for protein in Julia☆52May 15, 2025Updated last year
- ☆15Jul 14, 2025Updated last year
- ☆27Aug 25, 2023Updated 3 years ago
- Predicts small molecule - protein interaction affinities using convolutional representations of distance-dependent interactions with atte…☆19Sep 22, 2025Updated last year
- Enabling energy landscape exploration of proteins☆10Dec 6, 2023Updated 2 years ago
- 4D Genome Reconstruction and Dynamics Prediction: Maximum Entropy Based HI-C/Distance Map - Polymer Physics - Structures Method☆14Sep 25, 2026Updated last month
- Code supporting the Protein Design Archive (PDA) database publication☆16Aug 12, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆35Nov 7, 2022Updated 3 years ago
- ☆32Apr 30, 2026Updated 6 months ago
- Differentiable Pairing using Soft Scores☆11May 20, 2024Updated 2 years ago
- Calculate position-dependent diffusivity functions from trajectory data (usually from molecular dynamics). The approach is described in h…☆11Mar 25, 2025Updated last year
- Associative memory, Water mediated, Structure and Energy Model (AWSEM) protein simulation code☆42Oct 14, 2026Updated 2 weeks ago
- Comparison of principal components analysis with diffusion maps on toy data sets and a molecular simulation trajectory☆17Feb 1, 2017Updated 9 years ago
- Numerical inversion package for time-domain Nuclear Magnetic Resonance (NMR) relaxation and diffusion experiments. Click on the link bel…☆14Oct 16, 2026Updated last week
- Python solver for the Brownian, Stochastic, or Noisy Differential Equations☆12Jul 12, 2018Updated 8 years ago
- ☆12Aug 20, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…☆11Aug 12, 2024Updated 2 years ago
- General purpose repository for all things factorio☆16Updated this week
- A bioinformatics toolset for multiomic analysis☆22Aug 17, 2026Updated 2 months ago
- ☆12May 16, 2020Updated 6 years ago
- ☆13Jun 10, 2024Updated 2 years ago
- Python module for the calculation of shape complementarity☆13Apr 4, 2026Updated 6 months ago
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆17Aug 26, 2024Updated 2 years ago
- ⚠️ Deprecated — use pdb_cpp instead. Python library for simple operations on PDB/mmCIF coordinate files.☆12Apr 1, 2026Updated 6 months ago
- NanoOpt: Deriving potentials for coarse-grained nanoparticles via potential-matching☆12Oct 8, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- [JCIM 2026] Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆32Aug 20, 2026Updated 2 months ago
- ☆11Aug 5, 2022Updated 4 years ago
- Proteomics analysis workflows☆10Sep 3, 2026Updated last month
- ☆13Nov 19, 2019Updated 6 years ago
- ARCHIVED: see viral-ngs repo☆10Jan 12, 2026Updated 9 months ago
- A Package for Ribosome Profiling Data Analysis☆18Jan 17, 2026Updated 9 months ago
- Machine-learning force-field (MLFF)–native molecular modeling platform☆78Oct 20, 2026Updated last week