Flow-matching for coarse graining of miniproteins.
☆20Nov 18, 2022Updated 3 years ago
Alternatives and similar repositories for flowm
Users that are interested in flowm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This Denoising Force Field (DFF) codebase provides a Pytorch framework for the method presented in Two for one: Diffusion models and forc…☆67May 22, 2024Updated last year
- Timewarp is a research project using deep learning to accelerate molecular dynamics simulation.☆60Aug 21, 2024Updated last year
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆278Dec 10, 2024Updated last year
- [TMLR 2023] Simulate time-integrated coarse-grained MD with multi-scale graph neural networks☆74Aug 26, 2023Updated 2 years ago
- A framework for training energy-based diffusion models for sampling and energy estimation.☆94Nov 21, 2025Updated 4 months ago
- A Fast, Simplified Model for Molecular Generation with Improved Physical Quality☆27Oct 1, 2025Updated 5 months ago
- Generate intrinsically disordered peptide conformations via machine learning☆25May 26, 2024Updated last year
- MCGLPPI and MCGLPPI++: Integration of molecular coarse-grained model into geometric representation learning framework for protein-protein…☆25Jan 8, 2025Updated last year
- Generative backmapping of coarse-grained molecular systems using an equivariant graph neural network and flow-matching☆10Sep 17, 2025Updated 6 months ago
- ☆16Apr 9, 2024Updated last year
- learning coarse-grained force fields☆65Nov 30, 2021Updated 4 years ago
- Molecular mechanics systems and simulation data☆19Jun 3, 2024Updated last year
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆180Apr 6, 2023Updated 2 years ago
- Implementing PaiNN in Pytorch Geometric☆14Mar 10, 2022Updated 4 years ago
- Features Based Conformational Clustering of MD trajectories. See details at:☆10Nov 20, 2025Updated 4 months ago
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆18Oct 31, 2025Updated 4 months ago
- ☆11Oct 25, 2023Updated 2 years ago
- ☆34Apr 29, 2025Updated 10 months ago
- A simple but powerful VSCode extension for visualizing protein structures using the Molstar framework.☆35Oct 17, 2025Updated 5 months ago
- The GB99dms implicit solvent force field for proteins, plus scripts and data☆27Sep 19, 2025Updated 6 months ago
- Protein 3D Structure Prediction with DeepFold☆19Aug 26, 2024Updated last year
- Example to fit parameters and run CG simulations using TorchMD and Schnet☆47Feb 4, 2022Updated 4 years ago
- ☆12Apr 6, 2024Updated last year
- Code for the paper LaM-SLidE - Latent Space Modeling of Spatial Dynamical Systems via Linked Entities☆26May 23, 2025Updated 10 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆518Oct 21, 2025Updated 5 months ago
- Training neural network potentials☆470Mar 17, 2026Updated last week
- ☆52Jan 2, 2025Updated last year
- ☆20May 7, 2024Updated last year
- ☆21Aug 22, 2022Updated 3 years ago
- ☆30May 31, 2023Updated 2 years ago
- mirror of https://zhanglab.ccmb.med.umich.edu/EDTSurf/☆10Jun 20, 2023Updated 2 years ago
- Geometric super-resolution for molecular geometries☆42Jun 15, 2022Updated 3 years ago
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Dec 11, 2021Updated 4 years ago
- Cython implementation of PDB -> DataFrame parsing☆33Dec 23, 2025Updated 3 months ago
- Code for reviewers☆12Oct 8, 2024Updated last year
- ☆11Sep 16, 2024Updated last year
- MMTSB Tool Set☆33Jan 26, 2026Updated last month
- Computing the Committor with the Committor: an Anatomy of the Transition State Ensemble☆12Jul 12, 2024Updated last year
- ☆62Jul 7, 2025Updated 8 months ago