Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
☆207Mar 26, 2026Updated 2 weeks ago
Alternatives and similar repositories for topaz
Users that are interested in topaz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python programs for electron microscopy☆136Jan 15, 2026Updated 2 months ago
- Image-processing software for cryo-electron microscopy☆528Apr 1, 2026Updated last week
- A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.☆157Jan 25, 2021Updated 5 years ago
- ☆49Feb 20, 2026Updated last month
- Neural networks for cryo-EM reconstruction☆374Mar 31, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆24Updated this week
- ☆19Feb 3, 2025Updated last year
- ☆129Jun 18, 2025Updated 9 months ago
- A scientific image processing software suite with a focus on CryoEM and CryoET☆166Apr 2, 2026Updated last week
- Public release of Ptolemy package for automated targeting of Cryo-EM grids☆18Mar 9, 2025Updated last year
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 3 months ago
- Customized foundational image segmentation models for picking protein particles in cryo-EM images☆21Jan 7, 2026Updated 3 months ago
- A software for membrane signal subtraction to facilitate high-resolution cryo-EM reconstruction of membrane proteins embedded in their na…☆12Sep 4, 2025Updated 7 months ago
- ☆17Oct 21, 2024Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆32Sep 18, 2025Updated 6 months ago
- Self-supervised learning for isotropic cryoET reconstruction☆90Dec 29, 2024Updated last year
- ☆55Aug 19, 2024Updated last year
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Mar 5, 2026Updated last month
- A CNN for denoising cryo-EM images☆13Dec 9, 2019Updated 6 years ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆59Oct 3, 2025Updated 6 months ago
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- STAR file I/O in Python☆56Nov 24, 2025Updated 4 months ago
- The Swiss Army Knife for Editing Relion .STAR Files☆20Jul 1, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆17Sep 20, 2022Updated 3 years ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jan 23, 2026Updated 2 months ago
- cryo-ET particle picking by representation and metric learning☆43Nov 24, 2025Updated 4 months ago
- Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)☆82Apr 26, 2023Updated 2 years ago
- Amortized inference for ab initio heterogeneous cryo-EM reconstruction☆42Apr 11, 2023Updated 2 years ago
- Singularity image for cryo-CARE☆38Jan 7, 2022Updated 4 years ago
- Tools for user-free preprocessing of cryo-EM datasets☆27Nov 22, 2022Updated 3 years ago
- Python library that enables scripting access to CryoSPARC, a cryo-EM software package.☆47Mar 24, 2026Updated 2 weeks ago
- Automatic atomic model building program for cryo-EM maps☆163Apr 1, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Structure refinement and validation for crystallography and single particle analysis☆32Mar 31, 2026Updated last week
- New program to follow Relion projects in a browser!☆48Jan 5, 2026Updated 3 months ago
- ☆57May 14, 2024Updated last year
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆20Jul 28, 2023Updated 2 years ago
- Deep learning for cryo-EM maps post-processing☆58Jun 26, 2025Updated 9 months ago
- ☆23Nov 15, 2025Updated 4 months ago
- Xmipp is a suite of image processing programs, primarily aimed at single-particle 3D electron microscopy.☆43Updated this week