tbepler / topazLinks
Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
☆202Updated last month
Alternatives and similar repositories for topaz
Users that are interested in topaz are comparing it to the libraries listed below
Sorting:
- A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.☆154Updated 5 years ago
- Self-supervised learning for isotropic cryoET reconstruction☆87Updated last year
- PyTom software for cryo-tomogram processing☆44Updated 3 weeks ago
- A scientific image processing software suite with a focus on CryoEM and CryoET☆164Updated last week
- A curated list of awesome computational cryo-EM methods.☆139Updated 2 months ago
- ☆57Updated last year
- A curated list of awesome computational cryo-ET methods.☆67Updated 2 months ago
- ☆17Updated last year
- ☆129Updated 7 months ago
- Python programs for electron microscopy☆130Updated 2 weeks ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆49Updated 6 months ago
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Updated 9 years ago
- STAR file I/O in Python☆52Updated 2 months ago
- PIP package of cryoCARE☆45Updated last year
- GPU-accelerated template matching for cryo-ET☆49Updated 3 weeks ago
- A Python implementation of the MRC2014 file format☆86Updated 4 months ago
- ☆61Updated last week
- ☆52Updated last year
- ☆17Updated 3 months ago
- membrane segmentation in 3D for cryo-ET☆85Updated 2 months ago
- A collaborative knowledge sharing platform for the cryo-ET community☆20Updated last year
- 3D-CTF correction for cryo-electron tomography☆28Updated 7 years ago
- ☆42Updated 4 months ago
- Singularity image for cryo-CARE☆37Updated 4 years ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆57Updated 3 months ago
- ☆44Updated 2 years ago
- Parallel cryo electron tomography via beam image shift☆40Updated last month
- cryo-ET particle picking by representation and metric learning☆41Updated 2 months ago
- Neural networks for cryo-EM reconstruction☆367Updated last week
- ☆36Updated 3 weeks ago