Alternatives and similar repositories for ChimeraX

Users that are interested in ChimeraX are comparing it to the libraries listed below

• pemsley / coot
  Software for macromolecular model-building
  ☆153Updated this week
• lightdock / lightdock
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆374Updated 4 months ago
• ccsb-scripps / Illustrate
  Biomolecular Illustration Tool
  ☆121Updated last year
• PDB-REDO / dssp
  Application to assign secondary structure to proteins
  ☆236Updated last month
• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆122Updated last year
• haddocking / pdb-tools
  A dependency-free cross-platform swiss army knife for PDB files.
  ☆439Updated this week
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆168Updated last year
• project-gemmi / gemmi
  macromolecular crystallography library and utilities
  ☆313Updated last week
• ccsb-scripps / AutoDock-GPU
  AutoDock for GPUs and other accelerators
  ☆556Updated last month
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆381Updated last month
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆218Updated 3 weeks ago
• pablo-arantes / making-it-rain
  Cloud-based molecular simulations for everyone
  ☆469Updated this week
• AngelRuizMoreno / Jupyter_Dock
  Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting f…
  ☆274Updated 2 years ago
• Pymol-Scripts / Pymol-script-repo
  Collected scripts for Pymol
  ☆509Updated 5 months ago
• Discngine / fpocket
  fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…
  ☆434Updated last year
• mmagnus / rna-tools
  🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …
  ☆181Updated last week
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆295Updated 3 months ago
• dsehnal / LiteMol
  A library/plugin for handling 3D structural molecular data (not only) in the browser.
  ☆159Updated 6 years ago
• ChatMol / gromacs_copilot
  Let LLM run your MDs.
  ☆245Updated 4 months ago
• prody / ProDy
  A Python Package for Protein Dynamics Analysis
  ☆526Updated last week
• williamgilpin / pypdb
  A Python API for the RCSB Protein Data Bank (PDB)
  ☆334Updated 7 months ago
• avirshup / py3dmol
  ☆133Updated 9 years ago
• harmslab / pdbtools
  A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
  ☆180Updated 6 years ago
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆372Updated this week
• openmm / pdbfixer
  PDBFixer fixes problems in PDB files
  ☆614Updated 2 months ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆129Updated 2 years ago
• 3dem / model-angelo
  Automatic atomic model building program for cryo-EM maps
  ☆160Updated 2 weeks ago
• mittinatten / freesasa
  C-library for calculating Solvent Accessible Surface Areas
  ☆174Updated 2 months ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆271Updated last year
• mattarnoldbio / alphapickle
  ☆33Updated last year