RBVI / ChimeraX
Source code for molecular graphics program UCSF ChimeraX
☆178Updated this week
Alternatives and similar repositories for ChimeraX:
Users that are interested in ChimeraX are comparing it to the libraries listed below
- Application to assign secondary structure to proteins☆183Updated 2 weeks ago
- Software for biomolecular electrostatics and solvation calculations☆99Updated 6 months ago
- Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting f…☆266Updated last year
- Biomolecular Illustration Tool☆115Updated 6 months ago
- fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…☆328Updated 6 months ago
- P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.☆289Updated this week
- Interface for AutoDock, molecule parameterization☆230Updated last month
- Software for macromolecular model-building☆131Updated this week
- Official repo of the modular BioExcel version of HADDOCK☆129Updated this week
- View proteins and trajectories in the terminal☆104Updated 4 years ago
- gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.☆245Updated this week
- PDBFixer fixes problems in PDB files☆525Updated last week
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆148Updated 2 weeks ago
- oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis☆52Updated last week
- A dependency-free cross-platform swiss army knife for PDB files.☆399Updated 6 months ago
- Interaction Fingerprints for protein-ligand complexes and more☆391Updated this week
- Automatic atomic model building program for cryo-EM maps☆132Updated 2 weeks ago
- macromolecular crystallography library and utilities☆249Updated this week
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.☆285Updated last year
- Evolutionary couplings from protein and RNA sequence alignments☆257Updated last week
- Google Colab Tutorials for IBM3202☆256Updated 4 months ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆158Updated 6 months ago
- 📖 mmCIF support for hybrid/integrative models☆22Updated 3 months ago
- Accurately speed up AutoDock Vina☆142Updated last year
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm☆324Updated 3 months ago
- Cloud-based molecular simulations for everyone☆419Updated last week
- C-library for calculating Solvent Accessible Surface Areas☆127Updated 9 months ago
- CHARMM and AMBER forcefields for OpenMM (with small molecule support)☆282Updated last week
- Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme …☆501Updated last month
- Protein and nucleic acid validation service☆69Updated last year