Alternatives and similar repositories for ChimeraX

Users that are interested in ChimeraX are comparing it to the libraries listed below

• pemsley / coot
  Software for macromolecular model-building
  ☆150Updated this week
• ccsb-scripps / Illustrate
  Biomolecular Illustration Tool
  ☆119Updated last year
• lightdock / lightdock
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆360Updated 2 months ago
• project-gemmi / gemmi
  macromolecular crystallography library and utilities
  ☆300Updated this week
• PDB-REDO / dssp
  Application to assign secondary structure to proteins
  ☆225Updated 2 months ago
• prody / ProDy
  A Python Package for Protein Dynamics Analysis
  ☆511Updated 3 weeks ago
• ccsb-scripps / AutoDock-GPU
  AutoDock for GPUs and other accelerators
  ☆533Updated last month
• haddocking / pdb-tools
  A dependency-free cross-platform swiss army knife for PDB files.
  ☆434Updated last month
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆360Updated last month
• pablo-arantes / making-it-rain
  Cloud-based molecular simulations for everyone
  ☆458Updated 3 weeks ago
• Discngine / fpocket
  fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…
  ☆410Updated last year
• williamgilpin / pypdb
  A Python API for the RCSB Protein Data Bank (PDB)
  ☆331Updated 5 months ago
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆346Updated 2 weeks ago
• jensengroup / propka
  PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.
  ☆321Updated last year
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆205Updated this week
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆165Updated last year
• openmm / pdbfixer
  PDBFixer fixes problems in PDB files
  ☆598Updated 3 weeks ago
• avirshup / py3dmol
  ☆130Updated 9 years ago
• Pymol-Scripts / Pymol-script-repo
  Collected scripts for Pymol
  ☆500Updated 3 months ago
• AngelRuizMoreno / Jupyter_Dock
  Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting f…
  ☆273Updated 2 years ago
• wallnerlab / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆343Updated 2 weeks ago
• forlilab / Meeko
  Interface for AutoDock, molecule parameterization
  ☆310Updated last week
• molstar / pdbe-molstar
  Molstar PDBe implementation
  ☆122Updated this week
• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆115Updated last year
• mittinatten / freesasa
  C-library for calculating Solvent Accessible Surface Areas
  ☆164Updated this week
• harmslab / pdbtools
  A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
  ☆180Updated 6 years ago
• Valdes-Tresanco-MS / gmx_MMPBSA
  gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.
  ☆281Updated 3 weeks ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆267Updated last year
• dsehnal / LiteMol
  A library/plugin for handling 3D structural molecular data (not only) in the browser.
  ☆158Updated 6 years ago
• pb3lab / ibm3202
  Google Colab Tutorials for IBM3202
  ☆270Updated last year