Software for macromolecular model-building
☆157Apr 11, 2026Updated this week
Alternatives and similar repositories for coot
Users that are interested in coot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- dictionary of monomers and links☆19Mar 24, 2026Updated 2 weeks ago
- Useful aliases and startup settings for ChimeraX☆41Apr 4, 2026Updated last week
- Python customizations for the macromolecular model building software Coot.☆23Mar 25, 2026Updated 2 weeks ago
- The Swiss Army knife for carbohydrate structure validation, refinement and analysis☆29Apr 1, 2026Updated last week
- Image-processing software for cryo-electron microscopy☆528Apr 1, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- macromolecular crystallography library and utilities☆339Updated this week
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆59Oct 3, 2025Updated 6 months ago
- A Python implementation of the MRC2014 file format☆87Mar 2, 2026Updated last month
- A scientific image processing software suite with a focus on CryoEM and CryoET☆166Updated this week
- ☆19Jan 23, 2026Updated 2 months ago
- Python programs for electron microscopy☆136Jan 15, 2026Updated 2 months ago
- Structure refinement and validation for crystallography and single particle analysis☆32Mar 31, 2026Updated last week
- A software for membrane signal subtraction to facilitate high-resolution cryo-EM reconstruction of membrane proteins embedded in their na…☆12Sep 4, 2025Updated 7 months ago
- Interactive molecular dynamics based model building into low-resolution crystallographic and cryo-EM maps☆41Mar 6, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- MapQ is a plugin for UCSF Chimera to calculate Q-scores of an atomic model in a cryoEM map.☆17Aug 26, 2025Updated 7 months ago
- Automated workflow for preparing tilt series data for RELION 4.0.☆13Dec 17, 2023Updated 2 years ago
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- ☆57May 14, 2024Updated last year
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- IMOD model files as pandas dataframes in Python☆12Jun 26, 2025Updated 9 months ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆32Sep 18, 2025Updated 6 months ago
- From cryo-EM density map to atomic structure☆30Aug 17, 2025Updated 7 months ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆17Sep 20, 2022Updated 3 years ago
- Neural networks for cryo-EM reconstruction☆374Mar 31, 2026Updated last week
- Automatic atomic model building program for cryo-EM maps☆163Apr 1, 2026Updated last week
- These are programs that deal with anisotropy (both resolution and sampling)☆22Mar 16, 2018Updated 8 years ago
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Mar 5, 2026Updated last month
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆43Mar 11, 2025Updated last year
- Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled …☆207Mar 26, 2026Updated 2 weeks ago
- qFit: Automated and unbiased multi-conformer models from X-ray and EM maps.☆49Feb 16, 2026Updated last month
- New program to follow Relion projects in a browser!☆48Jan 5, 2026Updated 3 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- my crystallographic toolbox☆18Sep 14, 2025Updated 6 months ago
- These are the famous Uppsala Software Factory programs, rescued into GitHub.☆10Nov 3, 2022Updated 3 years ago
- ☆49Updated this week
- BoxNet implemented in TensorFlow and all current training data☆32Apr 25, 2019Updated 6 years ago
- ☆19Feb 3, 2025Updated last year
- Macromolecular viewer for crystallographers (WebGL)☆40Apr 5, 2026Updated last week
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18May 8, 2023Updated 2 years ago