RADar-AZDelta / Rabbit-in-a-BlenderLinks
An ETL pipeline to transform your EMP data to OMOP.
☆14Updated 3 weeks ago
Alternatives and similar repositories for Rabbit-in-a-Blender
Users that are interested in Rabbit-in-a-Blender are comparing it to the libraries listed below
Sorting:
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆37Updated last year
- Streamlined Data Mapping to OMOP☆19Updated this week
- Winners of the SNOMED CT Entity Linking Challenge☆37Updated last year
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆80Updated 2 weeks ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆113Updated 4 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆63Updated 4 months ago
- Course materials for OHDSI ETL tutorial☆48Updated 8 months ago
- ☆13Updated 5 months ago
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆68Updated last week
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 8 months ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- ☆12Updated last month
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆98Updated last year
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆45Updated 3 weeks ago
- UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT …☆14Updated 2 years ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆12Updated 4 years ago
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated 2 weeks ago
- FHIR to pandas dataframe for data analytics, AI and ML!☆38Updated 2 weeks ago
- A modern, lightweight medication sig parser.☆11Updated 5 months ago
- Provides backbone infrastructure elements for OHNLP toolsets.☆14Updated 2 months ago
- Conversion from FHIR HL7 to OMOP CDM☆17Updated 5 months ago
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆40Updated 6 months ago
- FHIRPath implementation in Python.☆67Updated last month
- Data Ingestion and Harmonization☆45Updated 2 months ago
- Oncology Working Group Repository☆57Updated 3 weeks ago
- ☆14Updated 4 months ago
- Benchmarking Large Language Models for FHIR☆38Updated last month
- Representation of Clinical Practice Guideline Recommendations in FHIR☆18Updated 2 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago