RADar-AZDelta / Rabbit-in-a-BlenderView external linksLinks
An ETL pipeline to transform your EMP data to OMOP.
☆15Oct 15, 2025Updated 4 months ago
Alternatives and similar repositories for Rabbit-in-a-Blender
Users that are interested in Rabbit-in-a-Blender are comparing it to the libraries listed below
Sorting:
- Streamlined Data Mapping to OMOP☆20Updated this week
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Nov 10, 2023Updated 2 years ago
- ETL Tool for converting datasets to OMOP CDM☆35Nov 24, 2022Updated 3 years ago
- A modern, lightweight medication sig parser.☆12Jan 21, 2025Updated last year
- Sample relational database load scripts and SQL queries for processing SNOMED CT-AU RF2 release files.☆18Jul 17, 2024Updated last year
- UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT …☆15Apr 15, 2023Updated 2 years ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆15Sep 28, 2020Updated 5 years ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Jan 17, 2022Updated 4 years ago
- CDM Builder leveraging AWS Lambda☆20Feb 6, 2026Updated last week
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Mar 5, 2024Updated last year
- ☆28May 13, 2024Updated last year
- OCL Terminology Service v2 in python/django☆19Feb 4, 2026Updated last week
- A package supporting the conversion from Synthea CSV to OMOP CDM☆120Feb 21, 2025Updated 11 months ago
- Data2Evidence is an end-to-end solution for management and analysis of OMOP data - https://data2evidence.org☆32Updated this week
- ☆13Jan 5, 2026Updated last month
- ☆28Jan 5, 2026Updated last month
- An implementation of the SNOMED CT Expression Constraint Language.☆27Feb 3, 2026Updated last week
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆27Apr 7, 2022Updated 3 years ago
- Repository for discussion of OpenSAFELY codelists☆10Sep 10, 2024Updated last year
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆39Dec 27, 2022Updated 3 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆89Updated this week
- ☆14Jan 15, 2026Updated last month
- Python implementation of Association Rule Mining☆11Apr 26, 2024Updated last year
- Winners of the SNOMED CT Entity Linking Challenge☆44Apr 11, 2024Updated last year
- ☆12Mar 15, 2024Updated last year
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆44Dec 19, 2024Updated last year
- A repository of all code and resources of my published blog articles.☆36Dec 21, 2025Updated last month
- Demo to show how to reuse a document using different metadata.☆12Mar 15, 2025Updated 11 months ago
- Services and guidelines for normalizing drug and other therapy terms☆13Jan 13, 2026Updated last month
- The JSON file for the ICD-9-CM and ICD-10-CM hierarchy, including diagnosis codes and procedure codes☆13Jan 26, 2023Updated 3 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Apr 2, 2024Updated last year
- ☆10Feb 4, 2026Updated last week
- ICD-10 nternational Statistical Classification of Diseases and Related Health Problems - Ground Truth and some Experimental R Code for N…☆14May 14, 2018Updated 7 years ago
- BioBERT model fine tuned for NER task on Pubmed Dataset☆10Apr 28, 2023Updated 2 years ago
- ☆20Sep 13, 2022Updated 3 years ago
- Provides backbone infrastructure elements for OHNLP toolsets.☆14May 6, 2025Updated 9 months ago
- Yet another static site generator☆14Jun 20, 2025Updated 7 months ago
- ETL code for converting Korean National Sample Cohort (NSC) derived from national insurance health service into OMOP-CDM v5 developed by …☆10Nov 20, 2019Updated 6 years ago
- Snow Owl Terminology Server. This version is no longer maintained. Please use the upstream version or the alternate Snowstorm Terminology…☆11Feb 11, 2020Updated 6 years ago