RADar-AZDelta / Rabbit-in-a-Blender
An ETL pipeline to transform your EMP data to OMOP.
☆11Updated 2 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for Rabbit-in-a-Blender
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆32Updated last year
- Convenient and Reusable Rapid Omop Transformer.☆14Updated this week
- ☆12Updated 4 months ago
- ETL Tool for converting datasets to OMOP CDM☆28Updated 2 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆21Updated 3 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆38Updated this week
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 2 weeks ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆11Updated 5 months ago
- Course materials for OHDSI ETL tutorial☆45Updated last month
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆71Updated last year
- CDM Builder leveraging AWS Lambda☆14Updated this week
- Oncology Working Group Repository☆56Updated 4 months ago
- ☆14Updated 6 years ago
- Data Ingestion and Harmonization☆42Updated last year
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆59Updated last month
- Winners of the SNOMED CT Entity Linking Challenge☆25Updated 7 months ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆84Updated last year
- A package supporting the conversion from Synthea CSV to OMOP CDM☆98Updated last month
- ☆12Updated 2 months ago
- Provides backbone infrastructure elements for OHNLP toolsets.☆14Updated this week
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆93Updated 5 months ago
- Training materials for Vocabulary & CDM Tutorial.☆20Updated 5 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆59Updated 2 years ago
- ☆18Updated 4 months ago
- ☆14Updated last month
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆76Updated 6 months ago
- FHIR Ontop OMOP Implementation☆16Updated 6 months ago
- FHIR to pandas dataframe for data analytics, AI and ML!☆33Updated this week
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated last year