Alternatives and similar repositories for covid-open

Users that are interested in covid-open are comparing it to the libraries listed below

• Emergent-Epidemics / infectious_disease_predictability
  Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri
  ☆20Updated 6 years ago
• kieshaprem / covid19-agestructureSEIR-wuhan-social-distancing
  Age-structured SEIR model for COVID-19 outbreak in Wuhan, China
  ☆41Updated 5 years ago
• ThomasMBury / deep-early-warnings-pnas
  Repository to accompany the publication 'Deep learning for early warning signals of tipping points', PNAS (2021)
  ☆61Updated 4 months ago
• snap-stanford / covid-mobility-tool
  ☆11Updated 4 years ago
• Rose-STL-Lab / Spatiotemporal_UQ
  Uncertainty Quantification for Deep Spatiotemporal Forecasting
  ☆23Updated last year
• computationalmedia / sir-hawkes
  SIR-Hawkes: Linking Epidemic Models and Hawkes Processes to Model Diffusions in Finite Populations
  ☆14Updated 7 years ago
• mila-iqia / COVI-AgentSim
  Covid-19 spread simulator with human mobility and intervention modeling.
  ☆19Updated 3 years ago
• runesen / spatio_temporal_causality
  Towards causal inference for spatio-temporal data: conflict and forest loss in Colombia
  ☆22Updated 3 years ago
• dsheldon / covid
  Bayesian modeling of COVID-19
  ☆31Updated 2 years ago
• behnamnkp / Deep-MTS-LSTM
  ☆12Updated last year
• amanda-minter / abc_R
  ☆11Updated 5 years ago
• AaltoPML / spatiotemporal-graph-kernels
  The official implementation of Non-separable Spatio-temporal Graph Kernels via SPDEs.
  ☆16Updated 3 years ago
• ostojanovic / BSTIM
  A Bayesian spatio-temporal interaction model for epidemiology.
  ☆25Updated 5 years ago
• snap-stanford / covid-mobility
  ☆147Updated 4 years ago
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆37Updated last year
• UGentBiomath / COVID19-Model
  Compartmental SEIQRD model to model the effects of government policies on SARS-CoV-2 spread in Belgium. Macro-economic Input-Output model…
  ☆23Updated 8 months ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆67Updated 4 months ago
• epidemics / COVIDNPIs
  Data and code for COVID-19 NPI effectiveness estimation.
  ☆30Updated 4 years ago
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated last year
• cdcepi / FluSight-forecast-hub
  ☆44Updated this week
• epistorm / epydemix
  epydemix, the ABC of epidemics
  ☆42Updated 3 weeks ago
• FK83 / scoringRules
  scoring rules to evaluate probabilistic forecasts
  ☆63Updated last year
• NSSAC / PatchSim
  Code for simulating the metapopulation SEIR model. Sample network for US national simulation included.
  ☆25Updated 2 weeks ago
• lnferreira / ts2net
  An R package to transform time series into networks
  ☆20Updated 10 months ago
• martinkrz / posepi1
  Points of Significance: Modeling infectious epidemics
  ☆11Updated 10 months ago
• covid19-model / simulator
  Spatiotemporal epidemic model introduced in the context of COVID-19, ACM TSAS, 2022
  ☆75Updated 3 months ago
• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆48Updated 10 months ago
• cdcepi / Flusight-forecast-data
  ☆40Updated last year
• nwrat / RCQSB2022_public
  This repo hosts data and scripts to replicate Ratledge et al 2022 in Nature
  ☆23Updated 2 years ago
• mcontisc / CRep
  Probabilistic generative model and efficient algorithm to model reciprocity in directed networks.
  ☆16Updated last year