ntpz870817 / DNA-storage-YYCLinks
Program designed for DNA storage using Yin-Yang transcoding algorithm
☆28Updated last year
Alternatives and similar repositories for DNA-storage-YYC
Users that are interested in DNA-storage-YYC are comparing it to the libraries listed below
Sorting:
- The first deep learning based Nanopore simulator which can simulate the process of Nanopore sequencing.☆121Updated 4 years ago
- Public repository for ShapeMapper 2 releases☆37Updated 8 months ago
- DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications☆104Updated 2 years ago
- A simple add-in for Excel supplying functions to calculate the reverse, complement, and reverse-complement of a nucleotide sequence☆45Updated 2 years ago
- Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)☆116Updated last month
- BGI DNA Storage Kit☆43Updated 7 months ago
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆158Updated 2 weeks ago
- Discovering known and novel miRNAs from small RNA sequencing data☆153Updated 11 months ago
- Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.☆234Updated 2 years ago
- RNA secondary structure/sequence profiles for homology search and alignment☆113Updated 9 months ago
- GFF and GTF file manipulation and interconversion☆305Updated last year
- IGV Web App☆123Updated last week
- Align multiple amino acid or nucleotide sequences.☆62Updated 4 years ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆125Updated 5 years ago
- Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.☆111Updated 11 months ago
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆250Updated last month
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆166Updated last year
- Fast and flexible ORF finder☆73Updated 3 years ago
- Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants …☆173Updated 5 years ago
- Program for aligning DNA sequences, a pairwise aligner.☆225Updated 2 months ago
- Oxford Nanopore Technologies fast5 API software☆154Updated last year
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆93Updated 2 years ago
- A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster to…☆168Updated 4 months ago
- Tools for manipulating biological data, particularly multiple sequence alignments☆158Updated 3 weeks ago
- Tandem Repeats Finder: a program to analyze DNA sequences☆184Updated 2 years ago
- Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)☆176Updated last week
- BWA-MEME: Faster BWA-MEM2 using learned-index☆125Updated last year
- Core code for the DeepHF prediction tool☆39Updated 6 years ago
- All source code of the crispor.org website☆78Updated 7 months ago
- Detection of m6A from direct RNA-Seq data☆130Updated 3 months ago