Course material for the Foundation in Computational Plant Science course at Michigan State University
☆35Oct 27, 2022Updated 3 years ago
Alternatives and similar repositories for PlantsAndPython
Users that are interested in PlantsAndPython are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Indel-aware consensus for aligned BAM☆21Aug 16, 2025Updated 11 months ago
- Analyze and simulate Pool-Seq time series data☆18Jun 16, 2022Updated 4 years ago
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Sep 17, 2020Updated 5 years ago
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- Tools for Plant Image Analysis☆55Sep 12, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code and example datasets for Does[0]Compute☆12Dec 2, 2021Updated 4 years ago
- A course offered by Stanford University☆15Sep 4, 2020Updated 5 years ago
- A Semi-Automated Machine Learning Pipeline. Developed by the Shiu Lab. Implemented using SciKit-Learn☆28May 7, 2024Updated 2 years ago
- iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline☆13Feb 10, 2026Updated 5 months ago
- ☆11Feb 17, 2025Updated last year
- Course notes and scripts from ASReml-R short course taught by Salvador Gezan at the USDA-ARS station in Miami, FL☆13Jun 22, 2016Updated 10 years ago
- ☆13Sep 14, 2022Updated 3 years ago
- Materials to reproduce the paper "Spatiotemporal patterns of urbanization in three Swiss urban agglomerations: insights from landscape me…☆13Oct 23, 2020Updated 5 years ago
- A library for running k-mers based GWAS☆127Oct 29, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Page for Workshop, "An Ecologist's Introduction to Data Science", presented at ESA/CSEE 2022 and for SORTEE☆10Nov 17, 2022Updated 3 years ago
- Curriculum Vitae☆14May 8, 2026Updated 2 months ago
- Some code to visualize your iNaturalist data.☆11Apr 6, 2021Updated 5 years ago
- Forest Fuels from Brown's Transects☆11Dec 14, 2018Updated 7 years ago
- Simple scripts for concatenate alignments and rename terminals for phylogenetics☆22Sep 20, 2022Updated 3 years ago
- Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach - Computational methods☆10Jan 19, 2022Updated 4 years ago
- Notes du cours GAE-7007 - Analyse et modélisation d'agroécosystèmes☆10Oct 16, 2024Updated last year
- A toolkit for identifying recombination and recombinant genotypes☆26Dec 3, 2025Updated 7 months ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆26Sep 14, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Examples of application of comparative methods in R☆60Oct 3, 2022Updated 3 years ago
- Tools for ecological niche evolution assessment considering uncertainty☆15Mar 10, 2023Updated 3 years ago
- the pangenome graph evaluator☆29Apr 12, 2021Updated 5 years ago
- Take a list of Pacbio files (.fofn) and creates a spreadsheet for data submission to the sequuence read archive (SRA)☆12Feb 28, 2016Updated 10 years ago
- Trait-Driven Models of Ecology and Evolution☆55Jul 11, 2026Updated last week
- lace up GFA files using panSN path name sub-ranges to coordinate the lacing☆14Jul 30, 2025Updated 11 months ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- ☆12May 8, 2021Updated 5 years ago
- NichePy: a collection of Python scripts for estimating overlap of ecological niche and species distribution models.☆15Dec 5, 2011Updated 14 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Plugins to draw field trial plots using R scripts in QGIS☆10Jul 16, 2024Updated 2 years ago
- A minimal tutorial on how to build a neural network classifier based on the iris data set using Keras/TensorFlow in R/RStudio☆18May 4, 2018Updated 8 years ago
- A repo contains historical and updated MTEC libraries.☆19May 18, 2026Updated 2 months ago
- Versatile tool for detecting selective sweeps with a variety of ages, strengths, starting allele frequencies, and completeness.☆15Feb 16, 2026Updated 5 months ago
- ☆21Nov 1, 2019Updated 6 years ago
- Repo for a Microbiome Protocol☆10Apr 26, 2018Updated 8 years ago
- PNNL TES incubation of CPCRW soil cores #openexperiment☆12Aug 29, 2017Updated 8 years ago