Alternatives and similar repositories for cbrain

Users that are interested in cbrain are comparing it to the libraries listed below

• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 3 months ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆61Updated last year
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 weeks ago
• preprocessed-connectomes-project / quality-assessment-protocol
  Scripts and documentation for the PCP's protocol for assessing data quality.
  ☆41Updated 4 years ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆38Updated 7 months ago
• andersonwinkler / PALM
  PALM: Permutation Analysis of Linear Models
  ☆78Updated 3 weeks ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 10 months ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆43Updated last year
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated last year
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆50Updated 4 months ago
• neurodesk / neurodesktop
  The plug-and-play, browser-accessible, containerised data analysis environment.
  ☆52Updated last week
• TimVanMourik / Porcupine
  Visual programming for neuroimaging analysis
  ☆63Updated 5 years ago
• zuoxinian / CCS
  Connectome Computation System
  ☆81Updated last year
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• akeshavan / mindcontrol
  MindControl is an app for quality control of neuroimaging pipeline outputs. Demo:
  ☆54Updated 6 years ago
• jmtyszka / bidskit
  Utility functions for working with DICOM and BIDS neuroimaging data
  ☆64Updated 2 months ago
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆268Updated 2 weeks ago
• PennLINC / xcpEngine
  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
  ☆65Updated 2 years ago
• yeatmanlab / AFQ-Browser
  Browser-based visualization tools for AFQ results
  ☆33Updated last year
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆71Updated last year
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆127Updated last year
• noahbenson / neuropythy
  A neuroscience library for Python, intended to complement the existing nibabel library.
  ☆126Updated 3 months ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆127Updated last year
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated last week
• poldracklab / fitlins
  Fit Linear Models to BIDS Datasets
  ☆76Updated 2 weeks ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆86Updated this week
• jordandekraker / Hippocampal_AutoTop
  ☆10Updated 4 years ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆97Updated 6 months ago
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆101Updated last year
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆90Updated last week