10k protein structures, no time limit, best val loss wins
☆67Oct 3, 2026Updated 2 weeks ago
Alternatives and similar repositories for nanoFold-Competition
Users that are interested in nanoFold-Competition are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A minimal PyTorch re-implementation of AlphaFold2's model & training☆641Oct 5, 2026Updated 2 weeks ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆65Dec 16, 2025Updated 10 months ago
- ☆34Dec 6, 2025Updated 10 months ago
- Lagrangian formulation of Doob's h-transform allowing for efficient rare event sampling☆61Mar 26, 2025Updated last year
- Official implementation of "Rigidity-Aware Geometric Pretraining for Protein Design and Conformational Ensembles" (ICLR 2026)☆20Mar 16, 2026Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆29Sep 29, 2026Updated 3 weeks ago
- ☆15Jun 24, 2025Updated last year
- MiniFold: Simple, Fast and Accurate Protein Structure Prediction☆96Jul 10, 2025Updated last year
- Protein Engineering via Exploration of an Energy Landscape☆148Updated this week
- ☆16May 12, 2026Updated 5 months ago
- Various Ideas for Protein Masked LM with ESMFold/ESM-2☆15Aug 17, 2023Updated 3 years ago
- An Open-source Drug Discovery Engine☆515Oct 8, 2026Updated 2 weeks ago
- Pharmacophore Elucidation with Convolutional Neural Networks and Reinforcement Learning☆17Apr 7, 2025Updated last year
- Plot multiple sequence alignment (MSA)☆17Apr 21, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Histidine Protonation State Optimizer for setting up MD simulations based on semi-empirical QM resonance☆20Mar 6, 2026Updated 7 months ago
- PyRosetta4 v2026-02-06 with (Global Interpreter Lock) disabled☆20Mar 22, 2026Updated 7 months ago
- Structure prediction of alternative protein conformations☆86Feb 24, 2025Updated last year
- A fast, programmable molecular viewer for research, scripting, and the web☆217Oct 13, 2026Updated last week
- Official JAX implementation of Riemannian Mean Flow for flow map learning on manifolds.☆26Oct 8, 2026Updated 2 weeks ago
- ☆158May 18, 2026Updated 5 months ago
- ☆190Jul 24, 2026Updated 2 months ago
- Scripts for the creation of CryptoBench, a new dataset of cryptic binding sites☆23Jun 24, 2026Updated 3 months ago
- Official implementation of All Atom Diffusion Transformers (ICML 2025)☆322Apr 13, 2026Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆174Sep 12, 2026Updated last month
- This is the official repository of GCP-VQVAE: A Geometry-Complete Language for Protein 3D Structure☆45May 9, 2026Updated 5 months ago
- "Rewriting protein alphabets with language models"☆26Oct 16, 2026Updated last week
- Conditionally Site-Independent Neural Evolution of Antibody Sequences (ICML '26)☆25Aug 30, 2026Updated last month
- A toolbox for Alphafold-related workflows☆23Sep 7, 2026Updated last month
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- Metrics for assessing 3D molecular structures.☆11May 9, 2026Updated 5 months ago
- Accelerating Open-Source Binding Affinity Predictions☆197Aug 22, 2026Updated 2 months ago
- Clusters protein chains based on CA distance difference☆19Oct 9, 2026Updated 2 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A fully open source biomolecular structure prediction model based on AlphaFold3☆901Updated this week
- Efficient manipulation of protein structures in Python☆68Jun 16, 2026Updated 4 months ago
- composite-objective protein design☆379Oct 6, 2026Updated 2 weeks ago
- Scripts to run AlphaFold3, Boltz-2, Chai-1, OpenFold3, Protenix & RF3 with MMseqs2 MSAs and custom templates.☆117Sep 3, 2026Updated last month
- Context Parallelism Code for Boltz-2☆62Sep 29, 2026Updated 3 weeks ago
- ☆63Apr 7, 2026Updated 6 months ago
- Official repository of Zatom-1, a general-purpose model for 3D molecules and materials☆55Jul 25, 2026Updated 2 months ago