☆13Oct 26, 2026Updated last week
Alternatives and similar repositories for polkapox
Users that are interested in polkapox are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- emm Automatic Isolate Labeller☆16Mar 25, 2025Updated last year
- 🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission☆29Oct 20, 2026Updated 2 weeks ago
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.☆10Oct 27, 2026Updated last week
- Scripts and reference files to type streptococcus pneumoniae☆11Aug 31, 2026Updated 2 months ago
- REcombination BARcode detector.☆17Apr 2, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A Python package for working with Bactopia☆12Aug 5, 2026Updated 3 months ago
- SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity☆13Aug 14, 2023Updated 3 years ago
- Sketch-based surveillance platform☆13Oct 29, 2026Updated last week
- A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification.☆36Oct 6, 2026Updated last month
- In silico multi-antigen sequence typing for Neisseria gonorrhoeae (NG-MAST)☆10Jun 17, 2026Updated 4 months ago
- Measles Sequence Analysis and Automation☆13Updated this week
- Spriggan is a pipeline used for assembly of bacterial whole genome sequence data and identification of antibiotic resistance genes.☆16Updated this week
- Repo for PrimerSchemes☆22Oct 27, 2026Updated last week
- Influenza data pipeline to automate genotyping assignment☆45Sep 10, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Profiling NTM WGS data☆19Oct 24, 2026Updated 2 weeks ago
- A pipeline for bioinformatics analysis of bacterial genomes☆33Oct 5, 2026Updated last month
- ☆23Sep 22, 2026Updated last month
- ☆16Mar 12, 2026Updated 7 months ago
- ☆22Jun 1, 2026Updated 5 months ago
- Utility to alias and dealias pango lineages☆23Dec 18, 2023Updated 2 years ago
- Genome browser 🧬👀🚀☆35Updated this week
- SISTR (Salmonella In Silico Typing Resource) command-line tool☆39Apr 24, 2025Updated last year
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Jan 21, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Nextflow pipeline for species-specific typing of bacteria☆11Oct 13, 2026Updated 3 weeks ago
- Databases for wg/cgMLST analysis with the PN2.0 software☆10May 7, 2026Updated 6 months ago
- VIGOR4☆24Aug 15, 2025Updated last year
- A Nextflow pipeline for fast and accurate SNP distance estimation from WGS read data or genome assemblies☆11Jun 11, 2026Updated 4 months ago
- A tool to aid virus sequencing and accelerate IRMA.☆13Updated this week
- ☆24Sep 3, 2026Updated 2 months ago
- A tool for typing SCCmec cassettes in assemblies☆14Aug 25, 2024Updated 2 years ago
- Easy installation for INSaFLU made by docker☆10Oct 1, 2026Updated last month
- NCBI Pathogen Detection Portal toolkit☆11Sep 6, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- The repository contains the source code of the NanoForms server (Czmil et al. NanoForms: an integrated server for processing, analysis an…☆11Feb 22, 2023Updated 3 years ago
- In silico Penicillin Binding Protein (PBP) typer for Streptococcus pneumoniae assemblies☆10Aug 6, 2024Updated 2 years ago
- ☆26Oct 17, 2018Updated 8 years ago
- Nextflow pipeline for bacterial clustering and linkage detection based on core genome analysis, designed to support genomic surveillance …☆12Updated this week
- Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens☆42Updated this week
- INSaFLU-TELEVIR: an free web-based (but also locally installable) bioinformatics suite for virus metagenomic detection and routine genomi…☆44Oct 7, 2026Updated last month
- Private, browser-based placement of genome sequences on phylogenetic trees using UShER.☆11Aug 12, 2026Updated 2 months ago