HUBioDataLab / ProtBENCHLinks
☆12Updated last year
Alternatives and similar repositories for ProtBENCH
Users that are interested in ProtBENCH are comparing it to the libraries listed below
Sorting:
- Drug-Target Interactive Prediction Model using ChemBERTa and ProtBert☆16Updated last year
- a method for CPI and DTA prediction☆11Updated 3 years ago
- Effective drug-target interaction prediction with mutual interaction neural network☆33Updated 3 years ago
- Autoregressive fragment-based diffusion for target-aware ligand design☆31Updated last year
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆28Updated 3 years ago
- ☆17Updated 3 years ago
- Drug-target binding affinity prediction using representation learning, graph mining, and machine learning☆25Updated 3 years ago
- BayeshERG Official Repository☆16Updated 6 months ago
- Interface-aware molecular generative framework for protein-protein interaction modulators☆18Updated 11 months ago
- Molecule Optimization via Fragment-based Generative Models☆42Updated 2 years ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆32Updated 3 years ago
- ☆13Updated 2 years ago
- DeepCDA☆15Updated 5 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 4 years ago
- MGA☆44Updated 4 years ago
- ☆28Updated 2 years ago
- Structure-based drug design based on Retrieval Augmented Generation☆24Updated last month
- Official implementation for ActFound (Nature Machine Intelligence): A bioactivity foundation model using pairwise meta-learning☆45Updated last year
- DTITR: End-to-End Drug-Target Binding Affinity Prediction with Transformers☆14Updated 2 years ago
- An efficient curriculum learning-based strategy for molecular graph learning☆17Updated 2 years ago
- The official PyTorch implementation of PGMG: A Pharmacophore-Guided Deep Learning Approach for Bioactive Molecule Generation.☆65Updated 2 years ago
- ☆20Updated 11 months ago
- ☆22Updated 2 years ago
- Benchmarking compound activity prediction for real-world drug discovery applications☆14Updated last year
- Atom-in-SMILES tokenizer for SMILES strings.☆42Updated last year
- ☆14Updated 4 years ago
- ☆28Updated 3 years ago
- Bioinformatics'2022 PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction☆38Updated 2 years ago
- Source code and data of the paper entitled "iCYP-MFE: Identifying Human Cytochrome P450 Inhibitors using Multi-task Learning and Molecula…☆17Updated 2 years ago
- COMA: Efficient Structure-constrained Molecular Generation using Contractive and Margin losses☆18Updated 2 years ago