Alternatives and similar repositories for ProtBENCH:

Users that are interested in ProtBENCH are comparing it to the libraries listed below

• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆26Updated 2 years ago
• CSUBioGroup / DTIAM
  A unified framework for predicting drug-target interactions, binding affinities and activation/inhibition mechanisms.
  ☆20Updated last month
• MahaThafar / Affinity2Vec
  Drug-target binding affinity prediction using representation learning, graph mining, and machine learning
  ☆24Updated 3 years ago
• admislf / MINN-DTI
  Effective drug-target interaction prediction with mutual interaction neural network
  ☆32Updated 2 years ago
• 595693085 / WGNN-DTA
  a method for CPI and DTA prediction
  ☆10Updated 2 years ago
• keiserlab / autofragdiff
  ☆27Updated 10 months ago
• larngroup / DTITR
  DTITR: End-to-End Drug-Target Binding Affinity Prediction with Transformers
  ☆13Updated last year
• Suryanarayanan-Balaji / GPT-MolBERTa
  ☆12Updated last year
• CSUBioGroup / BACPI
  A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.
  ☆30Updated 2 years ago
• hskang0906 / DTI-Prediction
  Drug-Target Interactive Prediction Model using ChemBERTa and ProtBert
  ☆12Updated 5 months ago
• DrugAI / ACNet
  ☆13Updated 2 years ago
• LBBSoft / DeepCDA
  DeepCDA
  ☆13Updated 5 years ago
• WeiLab-Biology / DeepProSite
  ☆31Updated last year
• MahaThafar / Drug-Target-Interaction-Prediciton-Method
  This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…
  ☆27Updated 3 years ago
• moonkisung / 3DGCL
  ☆9Updated last year
• Shen-Lab / CPAC
  [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction
  ☆14Updated 9 months ago
• smiles724 / MROT
  ☆12Updated last year
• cansyl / MDeePred
  Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery
  ☆27Updated 3 years ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆32Updated 10 months ago
• Layne-Huang / CoaDTI
  Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2
  ☆17Updated 2 years ago
• ChatterjeeAyan / AI-Bind
  Interpretable AI pipeline improving binding predictions for novel protein targets and ligands
  ☆29Updated 10 months ago
• sun-heqi / MultiPPIMI
  A deep learning framework for predicting interactions between protein-protein interaction targets and modulators
  ☆15Updated last year
• ZhiGroup / FDA
  Folding-Docking-Affinity framework for protein-ligand affinity prediction
  ☆17Updated last week
• anny0316 / GEOM-CVAE
  ☆15Updated 3 years ago
• j9650 / MedusaGraph
  ☆28Updated 2 years ago
• MolFilterGAN / MolFilterGAN
  ☆14Updated last year
• chembl / compound_target_pairs_dataset
  Automatic extraction of interacting compound-target pairs from ChEMBL.
  ☆13Updated last year
• kimeguida / POEM
  Pocket-Oriented Elaboration of Molecules: application to CDK8 inhibition
  ☆14Updated 2 years ago
• samsledje / ConPLex_dev
  ☆48Updated last year
• ohuelab / QEPPI
  Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions
  ☆18Updated last year