AngxiaoYue / ReQFlowLinks
[ICML 2025] 🧬 ReQFlow: Rectified Quaternion Flow for Efficient and High-Quality Protein Backbone Generation
☆80Updated 6 months ago
Alternatives and similar repositories for ReQFlow
Users that are interested in ReQFlow are comparing it to the libraries listed below
Sorting:
- [CIKM2023] The official implementation of "MPerformer: An SE(3) Transformer-based Molecular Perceptron"☆28Updated last year
- [ICML2025] The official implementation of "PolyConf: Unlocking Polymer Conformation Generation through Hierarchical Generative Models"☆32Updated 5 months ago
- [ICML2025] The official implementation of "WGFormer: An SE(3)-Transformer Driven by Wasserstein Gradient Flows for Molecular Ground-State…☆32Updated 5 months ago
- [CIKM2024] The official implementation of "MMPolymer: A Multimodal Multitask Pretraining Framework for Polymer Property Prediction"☆39Updated 3 months ago
- Code for paper: "Fine-Tuning Discrete Diffusion Models via Reward Optimization with Applications to DNA and Protein Design"☆62Updated 6 months ago
- ☆10Updated last year
- Evolutionary Algorithm with Diffusion Models for Protein Design☆28Updated 9 months ago
- Code for AAAI24 paper Text-Guided Molecule Generation with Diffusion Language Model☆29Updated 5 months ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆96Updated 10 months ago
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆44Updated last year
- The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"☆72Updated last year
- [NeurIPS 2024] The implementation for the paper "Geometric Trajectory Diffusion Models".☆31Updated 4 months ago
- ☆13Updated 7 months ago
- Source code of PETA: Evaluating the Impact of Protein Transfer Learning with Sub-word Tokenization on Downstream Applications.☆33Updated 6 months ago
- A Novel Approach for Protein Sequence Design Based on Secondary Strucure☆22Updated 8 months ago
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆31Updated last year
- Code for InstructBioMol, implementing the Nature Machine Intelligence paper "Advancing Biomolecular Understanding and Design Following Hu…☆27Updated 3 months ago
- [ICLR 2025 Spotlight] Boltzmann-Aligned Inverse Folding Model as a Predictor of Mutational Effects on Protein-Protein Interactions☆41Updated 8 months ago
- [AAAI 2025] CoPRA: Bridging Cross-domain Pretrained Sequence Models with Complex Structures for Protein-RNA Binding Affinity Prediction☆32Updated 11 months ago
- Code and data for the ACL2024 paper "InstructProtein: Aligning Human and Protein Language via Knowledge Instruction".☆22Updated last year
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆15Updated last month
- ☆41Updated last year
- InstructMol: Multi-Modal Integration for Building a Versatile and Reliable Molecular Assistant in Drug Discovery (COLING 2025)☆50Updated 11 months ago
- [COLM'24] We propose Protein Chain of Thought (ProCoT), which replicates the biological mechanism of signaling pathways as language promp…☆69Updated last week
- Learning Harmonic Molecular Representations on Riemannian Manifold, ICLR, 2023☆24Updated 2 years ago
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆47Updated 2 years ago
- [ICML 2024] Interaction-based Retrieval-augmented Diffusion Models for Protein-specific 3D Molecule Generation☆32Updated last year
- ☆51Updated last year
- NeurIPS24: Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization☆39Updated 7 months ago
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆41Updated 4 months ago