AllenInstitute / ipfxLinks
computes intrinsic cell features from intracellular electrophysiology data
☆27Updated 7 months ago
Alternatives and similar repositories for ipfx
Users that are interested in ipfx are comparing it to the libraries listed below
Sorting:
- QC and cell type assignment for patch-seq transcriptomics data☆20Updated last year
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆16Updated 3 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Tools for working with single-neuron morphological reconstructions☆21Updated last year
- COmmon COordinate FRAMEwork in R☆36Updated 5 years ago
- Histology processing☆66Updated 2 weeks ago
- 'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/cur…☆10Updated 5 months ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- ☆34Updated last month
- Multichannel Igor Electrophysiology Suite☆28Updated this week
- Tools to register histological section images and cell count locations to mouse brain atlas☆27Updated 3 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆21Updated 2 years ago
- ☆52Updated 9 months ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 8 months ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆24Updated 2 months ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- Region Of Interest Classification and Tracking☆19Updated this week
- Image processing and tools for widefield imaging☆18Updated 5 years ago
- Creating the code base for All-active Model generation written on top of Bluepyopt☆17Updated 4 years ago
- ☆18Updated 3 years ago
- Flow-Registration toolbox for 2P motion compensation☆24Updated 11 months ago
- ABBA, controlled from python☆13Updated 3 months ago
- Browser-based NWB visualization and DANDI exploration☆58Updated this week
- Rendering anatomical heatmaps with brainrender and matplotlib☆43Updated 2 weeks ago
- Dimensionality-reduction and classification for morphology and electrophysiology☆13Updated 9 months ago
- ☆8Updated 3 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆30Updated 5 years ago