This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their models at ISBI 2020.
☆67Dec 2, 2021Updated 4 years ago
Alternatives and similar repositories for MoNuSAC
Users that are interested in MoNuSAC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [TMI'2021][ISBI MoNuSAC'2020] 11th place solution to Multi-organ nuclei segmentation and classification challenge.☆32Jun 12, 2021Updated 4 years ago
- CoNIC Challenge☆69Feb 19, 2024Updated 2 years ago
- Evaluation code for the PanNuke dataset☆30Oct 20, 2020Updated 5 years ago
- ☆14Nov 21, 2022Updated 3 years ago
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆715Oct 27, 2023Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆43Jul 22, 2021Updated 4 years ago
- This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…☆45Feb 8, 2023Updated 3 years ago
- This repo is for Miccai monuseg challenge, by Jimmy from aetherAI☆17Oct 2, 2018Updated 7 years ago
- CNN based segmentation codes☆48Jan 19, 2023Updated 3 years ago
- Nuclear Segmentation and Classification with Imbalanced Annotations.☆17Aug 15, 2024Updated last year
- Pytorch implementation of FullNet-varCE☆54Feb 17, 2021Updated 5 years ago
- ☆16Oct 11, 2022Updated 3 years ago
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆19Oct 25, 2019Updated 6 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆73Nov 21, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The code of Triple U-net: Hematoxylin-aware Nuclei Segmentation with Progressive Dense Feature Aggregation.☆20Mar 17, 2022Updated 4 years ago
- PyTorch implementation of HoverNet as described in https://arxiv.org/abs/1812.06499☆23May 25, 2020Updated 6 years ago
- PointNu-Net Project☆19Dec 28, 2023Updated 2 years ago
- [MICCAI2020] Code for paper : Deep Semi-supervised Knowledge Distillation for Overlapping Cervical Cell Instance Segmentation☆54Nov 18, 2020Updated 5 years ago
- Working note for WSI analysis☆10Apr 3, 2023Updated 3 years ago
- ☆49Oct 10, 2022Updated 3 years ago
- Transformer Assisted Convolutional Neural Network for Cell Instance Segmentation [SegPC-2021]☆17Apr 13, 2021Updated 5 years ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆22Aug 17, 2020Updated 5 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Feb 7, 2020Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- In the code, we presents attention module architecture searching for nuclei semantic segmentation and classification.☆35Jun 29, 2025Updated 11 months ago
- Coincides with blogpost for using geojson and shapely☆33Nov 16, 2020Updated 5 years ago
- SONNET: A self-guided ordinal regression neural network for segmentation and classification of nuclei in large-scale multi-tissue histolo…☆17Sep 15, 2021Updated 4 years ago
- ☆31Apr 13, 2021Updated 5 years ago
- Dense Steerable Filter CNN☆76Nov 21, 2022Updated 3 years ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆179Apr 1, 2022Updated 4 years ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆46Aug 7, 2025Updated 9 months ago
- Transformer Breast Segmentation (TraBS)☆16Apr 19, 2023Updated 3 years ago
- ☆18Jun 10, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This Repository is project directory of the Distance Regression and Classification Network (DRCA-Net).DRCA-net is convolutional neural ne…☆13Jan 29, 2021Updated 5 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆116Jan 24, 2025Updated last year
- ☆12Oct 4, 2023Updated 2 years ago
- Leveraging Digital Pathology Foundation Models to characterize the tumor microenvironment (TME)☆30Nov 24, 2025Updated 6 months ago
- HCC_Deep_learning☆18Jun 8, 2020Updated 5 years ago
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆41Jul 15, 2024Updated last year
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆56Apr 4, 2022Updated 4 years ago