masih4 / CryoNuSegLinks
This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples.
☆40Updated 2 years ago
Alternatives and similar repositories for CryoNuSeg
Users that are interested in CryoNuSeg are comparing it to the libraries listed below
Sorting:
- This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their mo…☆64Updated 3 years ago
- CoNIC Challenge☆66Updated last year
- [TMI'2021][ISBI MoNuSAC'2020] 11th place solution to Multi-organ nuclei segmentation and classification challenge.☆31Updated 4 years ago
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆62Updated 3 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- ☆30Updated 5 years ago
- Self-supervised nuclei segmentation (MICCAI 2020)☆43Updated 4 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- ☆37Updated 3 years ago
- Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medic…☆62Updated 3 years ago
- Evaluation code for the PanNuke dataset☆28Updated 4 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆34Updated 2 years ago
- Interactive Segmentation of Nucleus☆66Updated 2 years ago
- MICCAI2020. "Multiple Instance Learning with Center Embeddings for Histopathology Image Classification"☆39Updated 4 years ago
- ☆35Updated 2 years ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆23Updated 3 years ago
- ☆16Updated last year
- Instance-based Vision Transformer for Subtyping of Papillary Renal Cell Carcinoma in Histopathological Image-MICCAI 2021☆17Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆68Updated 2 years ago
- Large-Scale Canine Cutaneous Mast Cell Tumor Dataset for Mitotic Figure Assessment on Whole Slide Images☆29Updated 2 months ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Updated 2 years ago
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆94Updated 5 years ago
- ☆67Updated 4 years ago
- MICCAI2021 Paper: Self-supervised visual representation learning for histopathological images☆29Updated 3 years ago
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆44Updated 4 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆72Updated 7 months ago
- ☆70Updated 4 years ago
- ☆16Updated 2 years ago
- StarDist PyTorch☆47Updated 2 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Updated 5 years ago