Alternatives and similar repositories for ucla-covid19-forecasts

Users that are interested in ucla-covid19-forecasts are comparing it to the libraries listed below

• chrism0dwk / covid19uk
  ☆12Updated 4 years ago
• covid-19-Re / estimateR
  R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic
  ☆11Updated last year
• martinmodrak / modelling-in-stan-2024
  Materials for the course on Bayesian model building run at Second Faculty of Medicine at Charles University in Prague
  ☆11Updated last year
• CDCgov / cfa_azure
  ☆10Updated last month
• shedding-hub / shedding-hub
  Data and statistical models for biomarker shedding.
  ☆14Updated this week
• CDCgov / ixa
  ☆19Updated this week
• CDCgov / cfa-epinow2-pipeline
  ☆12Updated this week
• reichlab / variant-nowcast-hub
  A repository to store COVID-19 variant nowcasts collected as a modeling hub.
  ☆18Updated this week
• nicsteyn2 / NZWastewaterModelling
  ☆10Updated 11 months ago
• rybern / mstan
  "Swappable Module" compiler for the Stan probabilistic programming language.
  ☆13Updated 2 years ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 3 years ago
• flatironinstitute / mcmc-monitor
  Monitor MCMC runs in the browser
  ☆37Updated last year
• CDCgov / cfa-gam-rt
  R package for real-time Rt estimation with penalized splines
  ☆14Updated 2 weeks ago
• epiforecasts / inc2prev
  Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
  ☆17Updated last year
• BDI-pathogens / EpiLine
  Bayesian Modelling in Epidemiology Case Line Lists
  ☆14Updated last year
• CDCgov / PyRenew
  Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.
  ☆17Updated this week
• mrc-ide / reactidd
  This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…
  ☆17Updated last year
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 3 years ago
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated last year
• seabbs / idmodelr
  Infectious disease model library and utilities
  ☆14Updated 3 years ago
• adamkucharski / 2020-cov-tracing
  Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…
  ☆13Updated 2 years ago
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆16Updated last month
• CDCgov / cfa-viral-lineage-model
  ☆11Updated last week
• LedgerInvesting / bayesblend
  Easily combine predictions from multiple Bayesian models using techniques including (pseudo) Bayesian model averaging, hierarchical stack…
  ☆36Updated 10 months ago
• epirecipes / EpiCats
  Applied category theory applied to epidemiological models
  ☆10Updated last year
• SABS-R3-Epidemiology / epiabm
  Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.
  ☆18Updated last week
• elizavetasemenova / gp_turing
  ☆15Updated 4 years ago
• goldingn / neuts2efficacy
  modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission
  ☆17Updated last year
• mrc-ide / mcstate
  Monte-Carlo State Space Models
  ☆19Updated last year
• charlesm93 / disease_transmission_workflow
  Supplementary code for paper "Bayesian workflow for disease transmission model".
  ☆27Updated 4 years ago