WashU Epigenome Browser (3rd generation, since 2025)
☆16Sep 8, 2026Updated last week
Alternatives and similar repositories for eg3
Users that are interested in eg3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- WashU Epigenome Browser (2nd generation, 2017-2022)☆77Mar 18, 2025Updated last year
- ☆24May 26, 2020Updated 6 years ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 6 years ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated last year
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Cookiecutter for community-maintained Jupyter Docker images☆18Sep 7, 2026Updated last week
- A Docker image for the CLIFF geolocation software.☆10Jun 12, 2018Updated 8 years ago
- Robust and scalable single-cell signature scoring☆29Sep 1, 2026Updated 2 weeks ago
- ☆17May 22, 2025Updated last year
- A collection of Jupyter notebooks.☆11Oct 31, 2017Updated 8 years ago
- Structural Variants ANnotator (SVAN)☆17Jun 27, 2026Updated 2 months ago
- A (mostly) universal methylation extractor for BS-seq experiments.☆182Jun 21, 2024Updated 2 years ago
- Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.☆54Jun 17, 2025Updated last year
- reference implementation of GA4GH WGS Quality Control Standards☆12Nov 25, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆17Jun 25, 2025Updated last year
- Approximate Bayesian Computation in python☆11Feb 19, 2015Updated 11 years ago
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Aug 26, 2026Updated 3 weeks ago
- A toolkit to quantify cell dynamics in living tissues☆13Dec 18, 2018Updated 7 years ago
- add true-negative SVs from a population callset to a truth-set.☆14Jun 17, 2022Updated 4 years ago
- ☆19Oct 21, 2024Updated last year
- Implementation of SpliceAI, Illumina's deep neural network to predict variant effects on splicing, in PyTorch.☆15Mar 3, 2023Updated 3 years ago
- 这个是IsaacSocket的连接程序，需要配合IsaacSocket Mod使用☆11Apr 23, 2024Updated 2 years ago
- 中文翻译:<rust-lang/rustlings> 帮你扶住 Rust 的那双手 ✅☆16May 29, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Computational Optimization of DNA Activity (CODA)☆68Apr 3, 2025Updated last year
- Object-oriented design pattern examples in Julia.☆14Feb 8, 2020Updated 6 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- NearlyFreeSpeech.net Dynamic DNS Utility☆12Apr 26, 2026Updated 4 months ago
- Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments (Lee et al., PLOS Computational Biology. 2023)☆55Aug 25, 2025Updated last year
- Feature Aggregate Depth Utility☆12Aug 20, 2024Updated 2 years ago
- Genomic Annotation Logic and Execution System☆13Apr 22, 2025Updated last year
- PySeqArray: data manipulation of whole-genome sequencing variants with SeqArray files in Python (pre-release version)☆14Aug 25, 2017Updated 9 years ago
- 这是一篇从0开始的化妆文档。☆17Sep 18, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- PyTorch Implementation of [AudioLCM]: a efficient and high-quality text-to-audio generation with latent consistency model.☆13Jun 15, 2024Updated 2 years ago
- Robust and ready-to-use tasks and workflows for a variety of bioinformatics pipelines. Use Flyte and Union to orchestrate anything from v…☆12Apr 2, 2025Updated last year
- GitHub action to setup singularity☆18Apr 11, 2023Updated 3 years ago
- 3DGB is a workflow to build 3D models of genomes from HiC data☆13May 6, 2026Updated 4 months ago
- A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution☆15Jul 14, 2026Updated 2 months ago
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago