Alternatives and similar repositories for msdanalyzer:

Users that are interested in msdanalyzer are comparing it to the libraries listed below

• vanTeeffelenLab / ExTrack
  ExTrack MLE for diffusive noisy single-particle tracks
  ☆13Updated this week
• qnano / drift-estimation
  Drift estimation
  ☆15Updated last year
• UU-cellbiology / DoM_Utrecht
  Detection of Molecules plugin for ImageJ, Utrecht University
  ☆15Updated 2 years ago
• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆24Updated 4 years ago
• nimwegenLab / MiM_NikonTi
  Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.
  ☆22Updated 10 months ago
• adanog / MSSR
  MSSR Plugin
  ☆13Updated 6 months ago
• python-microscopy / python-microscopy
  The python-microscopy environment - an open-source package for light microscopy
  ☆88Updated last week
• jries / SMAP
  ☆71Updated last month
• sylvainprigent / stracking
  python library for particles tracking in 2D+t and 3D+t scientific images
  ☆14Updated 11 months ago
• dbsb-juntendo / descSPIM
  User-affordable and versatile light-sheet microscopy system for cleared specimens
  ☆22Updated last month
• aherbert / gdsc-smlm
  GDSC Single Molecule Light Microscopy ImageJ Plugins
  ☆16Updated last week
• kwolbachia / KTZ-LUTs
  Handmade ImageJ / Fiji LUTs for microscopy, scientific good visualization and art.
  ☆11Updated 4 months ago
• maweigert / biobeam
  GPU accelerated beam propagation tools for biological light tissue simulations
  ☆36Updated 6 years ago
• pymmcore-plus / useq-schema
  An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.
  ☆19Updated this week
• AndrewGYork / tools
  Things we use regularly
  ☆29Updated 8 months ago
• tferr / Scripts
  Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
  ☆26Updated 2 years ago
• aelefebv / Mitometer
  Automated mitochondrial segmentation and tracking.
  ☆31Updated 3 years ago
• UU-cellbiology / ComDet
  ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)
  ☆16Updated 2 years ago
• dwaithe / ONBI_image_analysis
  This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course
  ☆18Updated 7 years ago
• zitmen / thunderstorm
  ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
  ☆97Updated 6 years ago
• guiwitz / neubias_academy_biapy
  NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter
  ☆62Updated last year
• hadim / pytrackmate
  Import Trackmate XML files in Python as Pandas dataframe
  ☆9Updated 2 months ago
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆18Updated last year
• royerlab / daxi
  High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy
  ☆27Updated 7 months ago
• nicost / uScopeControl
  A hub to start the next generation of Microscope Control Software
  ☆55Updated 4 years ago
• tpecot / DeepLearningForBiologists_FromClassificationToSegmentation
  ☆11Updated last month
• pymmcore-plus / pymmcore-plus
  Pure python/C++ micro-manager ecosystem
  ☆36Updated this week
• HenriquesLab / NanoJ-Core
  Core functionality of NanoJ
  ☆16Updated last year
• COBA-NIH / MicroscopyForBeginnersReferenceGuide
  A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
  ☆28Updated last month
• haesleinhuepf / devbio-napari
  ☆49Updated last week