Computational Statistical Mechanics Tutorials
☆15Nov 29, 2012Updated 13 years ago
Alternatives and similar repositories for tutorials
Users that are interested in tutorials are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Program for robust fitting of bonded Molecular Mechanics parameters☆15Jun 30, 2015Updated 11 years ago
- A tutorial code to perform Monte Carlo simulations of patchy particles☆14Dec 1, 2025Updated 10 months ago
- An open source Python framework for transition interface and path sampling calculations.☆118Jun 6, 2026Updated 4 months ago
- Markov State Models on the Muller potential: a MSMBuilder Tutorial☆12Mar 18, 2013Updated 13 years ago
- Contains scripts and data for the perses barnase barstar paper☆11Feb 14, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Endstate corrections from MM to QML potential☆15Feb 28, 2024Updated 2 years ago
- A tiny package to compute the dynamics of stochastic and molecular simulations☆33Jul 11, 2023Updated 3 years ago
- A C++ library to implement the "virtual-move" Monte Carlo algorithm for approximating the dynamical evolution of systems of strongly inte…☆22Jul 21, 2025Updated last year
- Automatic Mutual Information Noise Omission☆16Oct 8, 2024Updated 2 years ago
- Spectral Gap Optimization of Parameters☆18Mar 28, 2020Updated 6 years ago
- Local-first molecular modeling, WebGPU simulation, and conformer exploration in the browser☆28Sep 25, 2026Updated last month
- Python implementation of the umbrella integration method for potential of mean force (PMF) calculations☆17Feb 4, 2019Updated 7 years ago
- Metropolis Monte Carlo particle simulations for statistical mechanics in Python and Cython. Simulates Lennard-Jones particles using a Mar…☆12Jun 2, 2015Updated 11 years ago
- Some of useful tcl scripts to analyse data from VMD☆16Aug 2, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Using neural networks for enhanced sampling in computational biophysics☆16Aug 17, 2017Updated 9 years ago
- Tutorials of few enhanced sampling methods along with bash script to run the method in a single shot..☆49Feb 11, 2021Updated 5 years ago
- aimmd (AI for Molecular Mechanism Discovery) autonomously steers (a large number of) molecular dynamics simulations to efficiently sample…☆25Jul 13, 2026Updated 3 months ago
- Machine learning interatomic potential for condensed-phase reactive chemistry☆23Jun 6, 2024Updated 2 years ago
- ☆14Sep 1, 2026Updated last month
- Development version of the pbctools plugin for VMD.☆17Aug 19, 2025Updated last year
- Examples of applications of pymbar to various problems in simulation and experiment☆24Jan 16, 2015Updated 11 years ago
- Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations☆23Mar 13, 2018Updated 8 years ago
- Software Suite for Advanced General Ensemble Simulations☆94Feb 24, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 7 months ago
- Python Tools for NAMD☆25May 7, 2025Updated last year
- Tutorials for non-Markovian dynamic models (qMSM and IGME) to study protein dynamics.☆27Aug 15, 2024Updated 2 years ago
- Simulation-Enabled Estimation of Kinetic Rates - Version 2☆37Dec 10, 2025Updated 10 months ago
- Automatically prepare structures from the PDB for molecular dynamics simulation☆14Oct 19, 2026Updated last week
- fast modified discrete cosine transform (MDCT and IMDCT) for the Julia language☆12Nov 2, 2021Updated 4 years ago
- Open Source Antibiotics Series 2☆10Jan 23, 2023Updated 3 years ago
- ☆29Dec 1, 2020Updated 5 years ago
- The Surface Assessment via Grid Evaluation (SuAVE) software was developed to account for the effect of curvature in the calculations of s…☆12Jun 7, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Elegant C++ library for HDF5 files☆14Oct 6, 2016Updated 10 years ago
- Density based object completion over PBC.☆33Apr 23, 2026Updated 6 months ago
- Statistical and computational analysis of the human genome☆15Sep 22, 2021Updated 5 years ago
- This python code creates hybrid MD/MC (NAMD/GOMC) simulations for the NVT, NPT, GCMC, and GEMC-NVT ensembles☆49Oct 20, 2026Updated last week
- A command-line clone of the excellent macOS program LaTeXiT.☆15Nov 13, 2017Updated 8 years ago
- ☆12Jun 17, 2026Updated 4 months ago
- ElVis is a visualization system created for the accurate and interactive visualization of scalar fields produced by high-order spectral/h…☆14Oct 13, 2020Updated 6 years ago