Alternatives and similar repositories for mimic-iv-website

Users that are interested in mimic-iv-website are comparing it to the libraries listed below

• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆97Updated 5 months ago
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆118Updated 2 years ago
• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆67Updated 5 months ago
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆111Updated 2 years ago
• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆147Updated last year
• MIT-LCP / bloatectomy
  A python package for removing duplicate text in clinical notes or other documents
  ☆39Updated 5 years ago
• luoyuanlab / Clinical-Longformer
  ☆63Updated 2 years ago
• cumc-dbmi / cehrbert
  CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks
  ☆44Updated last week
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆308Updated last year
• asappresearch / clip
  ☆29Updated 4 years ago
• Medical-Event-Data-Standard / meds
  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data
  ☆92Updated last month
• mlhcmit / psets
  Consolidate all problem sets into one repo
  ☆16Updated 9 months ago
• landiisotta / convae_architecture
  ☆40Updated 3 years ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆30Updated last year
• AmsterdamUMC / AmsterdamUMCdb
  AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916
  ☆192Updated last month
• ncbi-nlp / NegBio
  High-performance tool for negation and uncertainty detection in radiology reports
  ☆164Updated 2 years ago
• som-shahlab / hf_ehr
  Training HuggingFace models on EHR data
  ☆35Updated last month
• mmcdermott / MEDS_transforms
  A simple set of MEDS polars-based ETL and transformation functions
  ☆39Updated 3 weeks ago
• mmcdermott / MEDS_Tabular_AutoML
  Limited automatic tabular ML pipelines for generic MEDS datasets.
  ☆18Updated 4 months ago
• Medical-Event-Data-Standard / meds_etl
  A collection of ETLs from common data formats to Medical Event Data Standard
  ☆37Updated 4 months ago
• yikuan8 / MIMIC-IV-Postgres
  Installing MIMIC-IV in a local Postgres database
  ☆43Updated 4 years ago
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆48Updated last year
• DATEXIS / UMLSParser
  Python module to parse UMLS source files
  ☆20Updated 2 years ago
• Medical-Event-Data-Standard / MEDS-DEV
  The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health
  ☆35Updated 3 weeks ago
• MIT-LCP / mimic-iv
  Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code
  ☆291Updated 4 years ago
• hoon9405 / GenHPF
  General Healthcare Predictive Framework
  ☆22Updated last week
• HPIMS / phe2vec
  Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records
  ☆24Updated 5 years ago
• Jwoo5 / integrated-ehr-pipeline
  ☆14Updated last year
• som-shahlab / ehrshot-benchmark
  A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
  ☆202Updated 6 months ago
• yy6linda / synthetic-ehr-benchmarking
  ☆31Updated 3 years ago