pnlbwh / CNN-Diffusion-MRIBrain-SegmentationLinks
CNN based brain masking
☆19Updated 7 months ago
Alternatives and similar repositories for CNN-Diffusion-MRIBrain-Segmentation
Users that are interested in CNN-Diffusion-MRIBrain-Segmentation are comparing it to the libraries listed below
Sorting:
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆40Updated 5 months ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆41Updated 2 months ago
- Cranial 4D Flow Analysis Tool☆14Updated 3 months ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated 10 months ago
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆35Updated last year
- FastSurfer Lesion Inpainting Tool (FastSurfer-LIT) for lesion inpainting e.g. for whole brain segmentation and cortical surface reconstru…☆18Updated last week
- iBEAT V2.0 Docker☆14Updated 3 weeks ago
- This code is used to automatically segment the left and right ventricles on bSSFP cardiac MRI. The aim of my project is to use these vent…☆10Updated 4 years ago
- AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs☆20Updated last year
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Updated 2 years ago
- Multi-site dMRI harmonization☆49Updated 8 months ago
- White matter tractography clustering and more...☆80Updated 7 months ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆115Updated last year
- perivascular space segmentation☆17Updated 3 years ago
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆74Updated 2 years ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆110Updated 6 months ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated last year
- Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensiti…☆25Updated 2 months ago
- Convert tractography studies from mrtrix into dicom for use in navigation software☆17Updated 11 months ago
- structural analysis of neonatal brain MRI scans☆59Updated 4 years ago
- Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.☆77Updated 10 months ago
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆47Updated 4 years ago
- ☆32Updated 3 years ago
- A command line tool for quantification of perfusion from ASL data☆12Updated 2 years ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆84Updated 3 years ago
- Full head segmentation☆17Updated 2 months ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆39Updated 4 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Updated last year
- A framework for joint super-resolution and image synthesis, without requiring real training data☆180Updated last year
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆84Updated last month