rvinas / GTEx-imputation
Gene Expression Imputation with Generative Adversarial Imputation Nets
☆12Updated 2 years ago
Alternatives and similar repositories for GTEx-imputation
Users that are interested in GTEx-imputation are comparing it to the libraries listed below
Sorting:
- Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits☆11Updated 3 years ago
- Starter repository for submissions to the CausalBench challenge for gene-gene graph inference from genetic perturbation experiments.☆29Updated last year
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…☆18Updated 4 years ago
- ☆16Updated 3 years ago
- ☆24Updated 2 years ago
- Stable Differentiable Causal Discovery (SDCD)☆22Updated 10 months ago
- Clean repository for the Cambridge COVID-19 ICU simulation☆12Updated 5 years ago
- A probabilistic model to cluster survival data in a variational deep clustering setting☆30Updated 2 years ago
- ☆32Updated 2 years ago
- A versatile interface to the knockoff methodology.☆24Updated 3 years ago
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆20Updated 2 years ago
- ☆18Updated 3 years ago
- Code for the paper "Deep Cox Mixtures for Survival Regression", Machine Learning for Healthcare Conference 2021☆29Updated 2 years ago
- Codebase for "AutoPrognosis: Automated Clinical Prognostic Modeling via Bayesian Optimization", ICML 2018.☆56Updated 4 years ago
- Variational autoencoders for cancer data integration☆27Updated 3 years ago
- Python package for the creation, manipulation, and learning of Causal DAGs☆152Updated 2 years ago
- Deep Graph Mapper: Seeing Graphs through the Neural Lens☆58Updated last year
- ☆40Updated 3 years ago
- Deep learning for single-cell transcript counts☆88Updated last month
- Hypergraph Factorisation☆23Updated 5 months ago
- ☆15Updated 4 years ago
- ☆17Updated 6 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- ☆40Updated 6 months ago
- Learning disentangled representations of single-cell data for high-quality generation☆16Updated last year
- Archetypal Analysis network (AAnet)☆33Updated 3 months ago
- An implementation of Consensus clustering in Python☆61Updated last year
- ☆61Updated last year
- PyTorch implementation of the paper "Neural Decomposition: Functional ANOVA with Variational Autoencoders"☆25Updated 4 years ago
- The starter repository for submissions to the GeneDisco challenge for optimized experimental design in genetic perturbation experiments.☆24Updated 3 years ago