Alternatives and similar repositories for pylapy

Users that are interested in pylapy are comparing it to the libraries listed below

• raphaelreme / trase-in
  Code for TraSE-IN paper
  ☆10Updated last year
• raphaelreme / koft
  Code and data for "Particle tracking in biological images with optical-flow enhanced Kalman filtering"
  ☆11Updated 5 months ago
• raphaelreme / byotrack
  Biological particle tracking (2D/3D)
  ☆13Updated 2 months ago
• seung-lab / cloud-files
  Threaded Python and CLI client library for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.
  ☆42Updated last week
• nlgranger / SeqTools
  A python library to manipulate and transform indexable data (lists, arrays, ...)
  ☆46Updated last year
• scijava / scyjava
  ⚡ Supercharged Java access from Python ⚡
  ☆48Updated last week
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆54Updated this week
• saalfeldlab / n5
  Not HDF5
  ☆177Updated this week
• nbgallery / ipyparams
  Pass parameters to Jupyter notebooks via URL arguments
  ☆20Updated 5 years ago
• cytoscape / cytoscape-jupyter-widget
  Cytoscape.js based network visualizer for Jupyter Notebook
  ☆38Updated 2 years ago
• filippocastelli / pyometiff
  OME-TIFF IO in python
  ☆21Updated last month
• seung-lab / fpzip
  Cython bindings for fpzip, a floating point image compression algorithm.
  ☆34Updated last month
• Blosc / python-blosc2
  A high-performance library for compressed ndarrays, with a flexible computational engine
  ☆120Updated this week
• AllenCellModeling / cookiecutter-pypackage
  A cookiecutter template to generate a new Python package.
  ☆23Updated 4 years ago
• robbmcleod / cpufeature
  Python module for detection of CPU features
  ☆28Updated 2 months ago
• vispy / jupyter_rfb
  Remote Frame Buffer for Jupyter
  ☆74Updated last week
• cellml / libcellml
  Repository for libCellML development.
  ☆17Updated 5 months ago
• darwinjob / pyramidio-bioformats
  Image pyramid reader and writer enhanced with bio-formats library reader
  ☆13Updated last year
• scikit-learn-contrib / sklearn-ann
  Integration with (approximate) nearest neighbors libraries for scikit-learn + clustering based on with kNN-graphs.
  ☆16Updated last week
• pauldmccarthy / indexed_gzip
  Fast random access of gzip files in Python
  ☆107Updated 3 months ago
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆30Updated last month
• glichtner / pystackreg
  A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.
  ☆87Updated 6 months ago
• aplbrain / dotmotif
  A performant, powerful query framework to search for network motifs
  ☆85Updated 8 months ago
• jupyterhub / simpervisor
  Simple Python3 Supervisor library
  ☆13Updated last month
• CAVEconnectome / MeshParty
  ☆36Updated last month
• imglib / imglyb
  Connecting Java/ImgLib2 + Python/NumPy
  ☆30Updated 3 weeks ago
• hadim / pygraphml
  Parse GraphML file in Python.
  ☆60Updated last year
• VCG / compresso
  Compresso: Efficient Compression of Segmentation Data For Connectomics
  ☆12Updated 3 years ago
• saalfeldlab / render
  Render transformed image tiles
  ☆34Updated this week
• constantinpape / z5
  Lightweight C++ and Python interface for datasets in zarr and N5 format
  ☆118Updated last week