raphaelreme / deep-trainerLinks
☆12Updated 3 months ago
Alternatives and similar repositories for deep-trainer
Users that are interested in deep-trainer are comparing it to the libraries listed below
Sorting:
- Launch, store and reproduce ML experiments from configuration files☆12Updated 4 months ago
- Code for TraSE-IN paper☆13Updated 7 months ago
- Biological Mutliple Object Tracking (2D/3D)☆20Updated last month
- Unsupervised, one-shot, instance-based active contour/snake using deep learning features in python.☆18Updated 5 months ago
- Code and data for "Particle tracking in biological images with optical-flow enhanced Kalman filtering"☆16Updated 3 months ago
- ☆12Updated 2 years ago
- Transformer-based cell tracking for live-cell microscopy☆123Updated last week
- Generate consensus 3D cells segmentations by combining 2D cell segmentations from any combination of xy, xz, yz views, compatible with ou…☆55Updated last month
- Pipeline for putting surface meshes into correspondence☆26Updated 3 years ago
- ☆22Updated 9 months ago
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆21Updated 2 months ago
- Time arrow prediction for live-cell microscopy☆21Updated last year
- A napari plugin for making animations☆95Updated last week
- Multi-Object Tracker using Integer Linear Equations☆38Updated last month
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python. In addition it al…☆17Updated last week
- Implementation of ThinPlateSpline☆32Updated last month
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated 2 years ago
- dask empowered fast4dreg☆15Updated last year
- Easy Volumetric Segmentation with Deep Learning☆28Updated 2 weeks ago
- ☆21Updated last year
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆119Updated this week
- ☆20Updated 3 weeks ago
- 3D shape analysis using deep learning☆29Updated 4 months ago
- ☆16Updated last week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Updated 3 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated this week
- Light microscopy simulation in python.☆43Updated this week
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 3 years ago
- Particle tracking by solving linear assignment problem.☆61Updated last week
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆38Updated this week