Alternatives and similar repositories for dna_data_storage

Users that are interested in dna_data_storage are comparing it to the libraries listed below

• BHam-1 / DNArSim
  DNA Archive Simulator (DNArSim) is a memory channel model that simulate the entire DNA Data Storage process: from synthesis to basecallin…
  ☆8Updated 3 years ago
• ntpz870817 / Chamaeleo
  BGI DNA Storage Kit
  ☆43Updated 6 months ago
• xieyy46 / SingleMod-v1
  ☆11Updated last month
• mem3nto0 / ModiDeC-RNA-modification-classifier
  ☆11Updated last month
• uwmisl / NanoporeTERs
  Code repository for 2019 NanoporeTERs paper.
  ☆7Updated 4 years ago
• uwmisl / data-nbt17
  Data for paper "Random Access in Large-Scale DNA Data Storage"
  ☆12Updated 7 years ago
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆94Updated 11 months ago
• liyu95 / DeepSimulator
  The first deep learning based Nanopore simulator which can simulate the process of Nanopore sequencing.
  ☆121Updated 4 years ago
• Zymrael / vortex
  Inference and numerics for multi-hybrid AI model architectures
  ☆71Updated last week
• Global-Biofoundries-Alliance / SynBioPython
  General low-level API
  ☆50Updated 3 years ago
• CIDARLAB / Cello-v2
  Cello v2 is the continuation of the Cello genetic circuit design software.
  ☆59Updated 3 years ago
• jeffdaily / parasail
  Pairwise Sequence Alignment Library
  ☆262Updated last year
• Opentrons / Protocols
  Repository for Public Protocols
  ☆58Updated 9 months ago
• Illumina / SpliceAI
  A deep learning-based tool to identify splice variants
  ☆453Updated last week
• jeffdaily / parasail-python
  Python bindings for the parasail C library.
  ☆103Updated 10 months ago
• jackievaleri / BioAutoMATED
  Automated machine learning for analyzing, interpreting, and designing biological sequences
  ☆170Updated last year
• manulera / OpenCloning
  An Open-Source web application to plan and document cloning and genome engineering
  ☆30Updated last week
• calico / borzoi
  RNA-seq prediction with deep convolutional neural networks.
  ☆181Updated last month
• google / deepsomatic
  DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing …
  ☆174Updated 2 months ago
• modernatx / seqlike
  Unified biological sequence manipulation in Python
  ☆207Updated last year
• songlab-cal / gpn
  Genomic Pre-trained Network
  ☆273Updated last week
• SynBioDex / pySBOL3
  Native python implementation of SBOL 3.0 specification
  ☆39Updated 4 months ago
• reinhardh / dna_rs_coding
  Error correction scheme for storing information on DNA using Reed Solomon codes
  ☆35Updated 4 years ago
• biodlab / RODAN
  A fully convolutional architecture for basecalling nanopore RNA sequencing data
  ☆11Updated 10 months ago
• google / deepconsensus
  DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) …
  ☆241Updated 4 months ago
• Genentech / gReLU
  gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
  ☆269Updated 2 weeks ago
• refresh-bio / FAMSA
  Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
  ☆186Updated last week
• ababaian / serratus
  Ultra-deep search for novel viruses
  ☆271Updated 2 years ago
• jmschrei / tangermeme
  Biological sequence analysis for the modern age.
  ☆232Updated last week
• Edinburgh-Genome-Foundry / DnaCauldron
  Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
  ☆62Updated 2 months ago