niekverw / ukbphenoLinks
☆31Updated 9 months ago
Alternatives and similar repositories for ukbpheno
Users that are interested in ukbpheno are comparing it to the libraries listed below
Sorting:
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆147Updated last year
- An R package to manipulate and explore UK Biobank data☆105Updated 2 years ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆35Updated 7 months ago
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆64Updated last week
- LDlinkR☆59Updated last year
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆27Updated last year
- R package for quality control of plink genetic datasets☆59Updated last week
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆39Updated 4 years ago
- LASSO for GWAS with summary statistics☆74Updated 4 years ago
- Non-linear Mendelian randomization☆54Updated last year
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆97Updated last month
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 4 months ago
- Reading, querying and writing GWAS summary data in VCF format☆84Updated last month
- Software implementing the Latent Causal Variable Model☆63Updated 5 years ago
- corrplot of LDSC genetic correlation results☆52Updated 3 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆90Updated last year
- GENetic Effect-Size distribution Inference from Summary-level data☆14Updated 4 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆20Updated 4 years ago
- R package for CAUSE☆56Updated last year
- Code for the in-dev PrediXcan Project☆27Updated 2 years ago
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆104Updated 2 weeks ago
- Genetics ToolboX R package☆32Updated 5 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆32Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆24Updated 3 years ago
- Mendelian Randomization with Biomarker Associations for Causality with Outcomes☆25Updated 6 years ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆82Updated 3 weeks ago
- GWAS for survival analysis in large cohorts☆21Updated 11 months ago
- Bayesian multi-response Mendelian randomisation☆18Updated 3 months ago