AptaNet as a Deep Learning approach for Aptamer-Protein Interaction Prediction
☆28Jun 15, 2021Updated 5 years ago
Alternatives and similar repositories for AptaNet
Users that are interested in AptaNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Aptamers are single-stranded nucleic acid or amino acid polymers that recognize and bind to targets with high affinity and selectivity. …☆16Jun 22, 2020Updated 6 years ago
- Supporting code for the paper "Predicting aptamer sequences that interact with target proteins using an Aptamer-Protein Interaction class…☆16Dec 31, 2021Updated 4 years ago
- A full-featured bioinformatics software collection for the comprehensive analysis of aptamers in HT-SELEX experiments.☆30Apr 14, 2023Updated 3 years ago
- ☆32Oct 3, 2023Updated 2 years ago
- AptaTrans Pipeline☆17Dec 9, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- alphafold FAPE loss☆10Sep 28, 2021Updated 4 years ago
- A diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies.☆29Apr 2, 2026Updated 5 months ago
- ☆20Sep 5, 2024Updated 2 years ago
- SIU: A Million-Scale Structural Small Molecule-Protein Interaction Dataset for Unbiased Bioactivity Prediction☆17Feb 17, 2025Updated last year
- Improving protein-protein interactions prediction accuracy using XGBoost feature selection and stacked ensemble classifier☆12Jun 18, 2020Updated 6 years ago
- ☆12Updated this week
- ☆11Apr 25, 2021Updated 5 years ago
- SE(3)-equivariant point cloud networks for virtual screening☆24Apr 29, 2023Updated 3 years ago
- OPUS-TASS: A Protein Backbone Torsion Angles and Secondary Structure Predictor Based on Ensemble Neural Networks☆10Jul 9, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A script to extract graph structure from multiple sequence alignment result and output as GFA/JSON for vg☆11Mar 27, 2019Updated 7 years ago
- Streamlit template for building SMART on FHIR apps in the Cerner ecosystem.☆11Sep 22, 2023Updated 2 years ago
- InteractionDrawer is a JavaScript library for the drawing of highly interactive 2D ligand interaction diagrams.☆30Oct 16, 2023Updated 2 years ago
- ☆32Jul 31, 2026Updated last month
- ☆10Nov 18, 2022Updated 3 years ago
- A Python library containing RNA-related bioinformatics functions and classes.☆23Updated this week
- A fast limit order book implementation in Go, inspired by voyager's winning 2011 QuantCup entry. (Also see kmanley/orderbook, the Python …☆14May 15, 2020Updated 6 years ago
- A Disruptor-Lite implementation in python☆14Mar 8, 2019Updated 7 years ago
- This repository contains the code for simulating the growth of a Biofilm after attachment using Molecular dynamics simulation methods. Th…☆11May 21, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Sentieon DNAscope + Machine Learning Model☆12Mar 19, 2025Updated last year
- ☆15Jan 16, 2018Updated 8 years ago
- Helpful handful of programs, completely open-source and free☆11Mar 26, 2021Updated 5 years ago
- Plot your data from Arduino on your phone with phyphox app☆10Jan 26, 2020Updated 6 years ago
- A curated list of awesome protein design research, software and resources.☆16May 10, 2022Updated 4 years ago
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated 2 years ago
- ☆14Mar 7, 2024Updated 2 years ago
- Segmentation of nucleic acid binding interface on protein surface with geometric deep learning☆14May 3, 2023Updated 3 years ago
- RNA Fusion Detection and Quantification☆18Oct 31, 2018Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- BINANA (BINding ANAlyzer) analyzes the geometries of predicted ligand poses to identify molecular interactions that contribute to binding…☆26Jun 30, 2025Updated last year
- 유니티 교과서, 개정6판☆20Jul 4, 2023Updated 3 years ago
- A small command line tool to fetch data from Zwift and report on it.☆10Nov 9, 2023Updated 2 years ago
- Generator and regressor neural networks for antimicrobial peptides☆25Jan 30, 2024Updated 2 years ago
- Python utility and library for converting Nikon .nd2 files to pyramidal OME TIFF.☆13May 13, 2022Updated 4 years ago
- A fast price-time-quantity limit order book (LOB) matching engine written in Rust☆17Jan 11, 2025Updated last year
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆106May 23, 2025Updated last year