levrex / DiagnosisExtraction_ML
Pipeline for building Machine Learning Classifiers for the diagnosis of EHR text-data. We used this pipeline for our study, published here: https://doi.org/10.2196/23930.
☆12Updated last year
Alternatives and similar repositories for DiagnosisExtraction_ML
Users that are interested in DiagnosisExtraction_ML are comparing it to the libraries listed below
Sorting:
- ☆11Updated 5 years ago
- Patient2Vec: A Personalized Interpretable Deep Representation of the Longitudinal Electronic Health Record☆107Updated 6 years ago
- Embedding Complexity In the Data Representation Instead of In the Model (arXiv:1802.04233)☆24Updated 7 years ago
- Clinical NLP workshop for ODSC☆39Updated 5 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- Automatic classification of medical patient discharge notes into standard disease labels, using deep learning models☆30Updated 6 years ago
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆32Updated 5 years ago
- [Python] Additional works on Edward Choi's medGAN (generative adversarial network for electronic health records). In particular: boosting…☆24Updated 2 years ago
- ☆22Updated 2 years ago
- Notebook for BERT medical named entity recognition☆42Updated 2 years ago
- This is the source code for the paper 'Analysis and Prediction of Unplanned Intensive Care Unit Readmission'☆31Updated 6 years ago
- Deep Learning for EHR papers☆34Updated 5 years ago
- Predicting Medical Billing Codes (ICD9) from Clinical Notes (in MIMIC-III datasets) using Deep Learning☆25Updated 4 years ago
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated last year
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 2 years ago
- Source code of ME2Vec.☆14Updated last year
- MedXN is a medication normalization system built upon Apache UIMA framework.☆23Updated last year
- MIMIC preprocessing for the ICML paper "Dynamic Measurement Scheduling for Event Forecasting Using Deep RL"☆19Updated 6 years ago
- Predicting ICD Codes from Clinical Notes☆61Updated 4 years ago
- Library and CLI for randomly generating medical data like you might get out of an Electronic Health Records (EHR) system☆31Updated 3 months ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆74Updated 2 years ago
- A list of awesome resources on the application of machine learning in healthcare☆27Updated 4 years ago
- ☆70Updated 3 years ago
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆43Updated 2 years ago
- General tutorials for the setup and use of MedCAT.☆37Updated this week
- Source Code for 'AI for Healthcare with Keras and Tensorflow 2.0' by Anshik Bansal☆15Updated 3 years ago
- ☆16Updated 4 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆80Updated 2 weeks ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆93Updated 11 months ago