Alternatives and similar repositories for covid

Users that are interested in covid are comparing it to the libraries listed below

• aakhmetz / COVID19IncubationPeriod
  Study on estimating incubation period distribution and other epidemiological parameters for a novel coronavirus disease (COVID-19)
  ☆14Updated 5 years ago
• epidemics / COVIDNPIs
  Data and code for COVID-19 NPI effectiveness estimation.
  ☆30Updated 4 years ago
• rs-delve / covid19_datasets
  Interfacing several COVID-19 related datasets
  ☆45Updated 3 years ago
• cmmid / covid-age
  Analysis code and data for COVID-19 age-specific clinical fraction
  ☆24Updated 5 years ago
• CoronaNetDataScience / corona_tscs
  This is the raw data repository (policy record format) of the CoronaNet project on government responses to the COVID-19 pandemic.
  ☆101Updated 2 years ago
• synthpops / synthpops
  Create synthetic populations for COVID-19 epidemic analyses.
  ☆49Updated 11 months ago
• Jasminapg / Covid-19-Analysis
  Mathematical modelling of different strategies to reopen schools in the UK post COVID-19
  ☆14Updated 3 years ago
• wpgp / BEARmod
  Basic Epidemic, Activity, and Response COVID-19 model
  ☆31Updated 5 years ago
• computationalmedia / sir-hawkes
  SIR-Hawkes: Linking Epidemic Models and Hawkes Processes to Model Diffusions in Finite Populations
  ☆14Updated 7 years ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 3 years ago
• jriou / covid_adjusted_cfr
  ☆89Updated 5 years ago
• cbreto / panelPomp
  R package for statistical inference using panelPOMPs (panel Partially Observed Markov Processes)
  ☆10Updated last year
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆39Updated 2 years ago
• kieshaprem / covid19-agestructureSEIR-wuhan-social-distancing
  Age-structured SEIR model for COVID-19 outbreak in Wuhan, China
  ☆41Updated 5 years ago
• kingaa / sbied
  Simulation-based Inference for Epidemiological Dynamics
  ☆26Updated 9 months ago
• gcant / temporal-recovery-tree-py
  Recover temporal information from grown trees, using Python
  ☆11Updated 4 years ago
• MrinankSharma / COVID19NPISecondWave
  ☆15Updated 4 years ago
• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆49Updated last year
• milkha / Splines_in_Stan
  Implementation of B-Splines in Stan
  ☆51Updated 8 years ago
• adamhaber / stan2tfp
  stan2tfp is a lightweight interface to the TensorFlow Probability backend of the Stan compiler. It provides the necessary objects and fun…
  ☆25Updated 4 years ago
• seantalts / simulation-based-calibration
  Repo for code from the SBC paper
  ☆24Updated 6 years ago
• jgabry / bayes-workflow-book
  Source files for the book "Bayesian Workflow Using Stan"
  ☆97Updated 4 years ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆67Updated 9 months ago
• epiforecasts / socialmixr
  Derive social mixing matrices from survey data.
  ☆43Updated this week
• cdcepi / FluSight-forecasts
  FluSight Forecast Submissions
  ☆19Updated last year
• lilywang1988 / eSIR
  Extended state-space SIR epidemiological models
  ☆75Updated 4 years ago
• Emergent-Epidemics / infectious_disease_predictability
  Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri
  ☆21Updated 4 months ago
• zalandoresearch / ACIC23-competition
  Data for and description of the ACIC 2023 data competition
  ☆32Updated 2 years ago
• crondonm / TrackingR
  Python code for "Tracking R of COVID-19 A New Real-Time Estimation Using the Kalman Filter".
  ☆27Updated 3 years ago
• anastasiachtz / COMMAND_stan
  Contemporary statistical inference for infectious disease models using Stan
  ☆16Updated 6 years ago