QuIIL / Sonnet
SONNET: A self-guided ordinal regression neural network for segmentation and classification of nuclei in large-scale multi-tissue histology images
☆17Updated 3 years ago
Alternatives and similar repositories for Sonnet:
Users that are interested in Sonnet are comparing it to the libraries listed below
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆63Updated this week
- ☆49Updated 2 months ago
- ☆35Updated 2 years ago
- DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs☆55Updated 3 months ago
- Python library for processing whole slide images (WSIs) in sdpc format☆52Updated last month
- [MedIA 2024] The implementation of AdvMIL: Adversarial Multiple Instance Learning for the Survival Analysis on Whole-Slide Images☆33Updated last year
- SI-MIL☆26Updated 2 months ago
- [MICCAI'23] HIGT: Hierarchical Interaction Graph-Transformer for Whole Slide Image Analysis☆32Updated 6 months ago
- ☆23Updated last month
- MuRCL: Multi-instance Reinforcement Contrastive Learning for Whole Slide Image Classification☆25Updated 3 years ago
- ☆52Updated 3 years ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆143Updated 10 months ago
- [ICCV 2023 Oral] Multiple Instance Learning Framework with Masked Hard Instance Mining for Whole Slide Image Classification☆73Updated last week
- One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification☆82Updated 3 months ago
- A simple tool used for normalize whole slide images, support macenko, reinhard, vahadane (GPU accelerate)☆20Updated 5 months ago
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆129Updated 4 months ago
- [CVPR'23] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning☆83Updated last year
- [ESWA 2023] Implementation of DSCA: A Dual-stream Network with Cross-attention on Whole-Slide Image Pyramids for Cancer Prognosis☆23Updated 11 months ago
- ☆26Updated 2 years ago
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆26Updated last year
- The official implementation of GPFM☆52Updated last month
- ☆70Updated 3 years ago
- ☆57Updated 6 months ago
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆92Updated 2 weeks ago
- Multi-Scale Representation Attention based Deep Multiple Instance Learning for Gigapixel Whole Slide Image Analysis☆26Updated last year
- ☆37Updated 3 years ago
- DeeperHistReg - Source Code☆51Updated 10 months ago
- RandStainNA: Simple and efficient augmentations for histology [MICCAI 2022]☆53Updated 2 years ago
- Iteratively Coupled Multiple Instance Learning☆19Updated 3 months ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆79Updated last month