Alternatives and similar repositories for SDoH_SODA

Users that are interested in SDoH_SODA are comparing it to the libraries listed below

• kexinhuang12345 / clinicalBERT
  ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
  ☆434Updated 3 years ago
• gmichalo / UmlsBERT
  ☆101Updated 3 years ago
• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆155Updated 2 years ago
• Georgetown-IR-Lab / QuickUMLS
  System for Medical Concept Extraction and Linking
  ☆431Updated last year
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆49Updated 2 years ago
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆312Updated last year
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆72Updated 3 years ago
• kormilitzin / med7
  ☆221Updated last year
• acadTags / Awesome-medical-coding-NLP
  A collection of papers on automated medical coding from free-texts
  ☆151Updated last year
• CogStack / MedCAT
  Medical Concept Annotation Tool
  ☆522Updated 6 months ago
• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆99Updated last year
• nwams / ClinicalBERT-Deep-Learning--Predicting-Hospital-Readmission-Using-Transformer
  Blog post on Medium
  ☆51Updated 3 years ago
• ncbi-nlp / BioWordVec
  ☆153Updated 2 years ago
• suamin / ICD-BERT
  ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)
  ☆76Updated 2 years ago
• OHDSI / Criteria2Query
  [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…
  ☆74Updated 3 weeks ago
• Yale-LILY / Ascle
  A Python Natural Language Processing Toolkit for Medical Text Generation
  ☆84Updated 8 months ago
• luoyuanlab / Clinical-Longformer
  ☆63Updated 2 years ago
• CogStack / MedCATtutorials
  General tutorials for the setup and use of MedCAT.
  ☆41Updated 8 months ago
• uf-hobi-informatics-lab / GatorTron
  all scripts used in gatortron project
  ☆130Updated 2 years ago
• chanzuckerberg / MedMentions
  A corpus of Biomedical papers annotated with mentions of UMLS entities.
  ☆342Updated 4 years ago
• simonlevine / clinical-longformer
  ☆38Updated 3 years ago
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆80Updated 3 years ago
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆71Updated 9 months ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆99Updated 7 months ago
• ncbi-nlp / bluebert
  BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
  ☆588Updated 2 years ago
• GanjinZero / ICD-MSMN
  Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]
  ☆54Updated 3 years ago
• MiuLab / PLM-ICD
  PLM-ICD: Automatic ICD Coding with Pretrained Language Models
  ☆76Updated 2 years ago
• medspacy / medspacy
  Library for clinical NLP with spaCy.
  ☆631Updated 6 months ago
• dreji18 / Bio-Epidemiology-NER
  Recognize bio-medical entities from a text corpus
  ☆131Updated 2 years ago
• Lybarger / sdoh_extraction
  ☆19Updated 6 months ago