uf-hobi-informatics-lab / SDoH_SODALinks
☆18Updated last year
Alternatives and similar repositories for SDoH_SODA
Users that are interested in SDoH_SODA are comparing it to the libraries listed below
Sorting:
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆45Updated last year
- General tutorials for the setup and use of MedCAT.☆37Updated last month
- UCSF Philter for UC☆13Updated 11 months ago
- ☆98Updated 3 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated last month
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆69Updated last year
- A collection of papers on automated medical coding from free-texts☆144Updated 6 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆94Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆81Updated last month
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated last year
- Mapping the MIMIC-III database to the OMOP schema☆136Updated last year
- ☆18Updated last year
- ☆38Updated 3 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆68Updated last week
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆75Updated 2 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- Predicting ICD Codes from Clinical Notes☆61Updated 4 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- ☆22Updated 2 years ago
- Transformers for Clinical NLP☆25Updated last week
- all scripts used in gatortron project☆118Updated last year
- ☆55Updated 5 years ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- ☆61Updated last year
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 2 years ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆88Updated 3 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆53Updated 2 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated this week