Alternatives and similar repositories for SDoH_SODA

Users that are interested in SDoH_SODA are comparing it to the libraries listed below

• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆47Updated last year
• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆152Updated 2 years ago
• CogStack / MedCAT
  Medical Concept Annotation Tool
  ☆509Updated last month
• kexinhuang12345 / clinicalBERT
  ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
  ☆426Updated 2 years ago
• acadTags / Awesome-medical-coding-NLP
  A collection of papers on automated medical coding from free-texts
  ☆147Updated 9 months ago
• gmichalo / UmlsBERT
  ☆99Updated 3 years ago
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆302Updated last year
• OHDSI / Criteria2Query
  [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…
  ☆70Updated this week
• Yale-LILY / Ascle
  A Python Natural Language Processing Toolkit for Medical Text Generation
  ☆83Updated 3 months ago
• Georgetown-IR-Lab / QuickUMLS
  System for Medical Concept Extraction and Linking
  ☆414Updated last year
• luoyuanlab / Clinical-Longformer
  ☆63Updated 2 years ago
• nwams / ClinicalBERT-Deep-Learning--Predicting-Hospital-Readmission-Using-Transformer
  Blog post on Medium
  ☆49Updated 2 years ago
• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆95Updated last year
• kormilitzin / med7
  ☆219Updated 9 months ago
• Lybarger / sdoh_extraction
  ☆18Updated 2 months ago
• uf-hobi-informatics-lab / GatorTron
  all scripts used in gatortron project
  ☆122Updated last year
• suamin / ICD-BERT
  ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)
  ☆76Updated 2 years ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆96Updated 2 months ago
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆69Updated 4 months ago
• CogStack / MedCATtutorials
  General tutorials for the setup and use of MedCAT.
  ☆40Updated 3 months ago
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆73Updated 2 years ago
• WengLab-InformaticsResearch / UMLS-EDA
  A light-weighted UMLS-based data augmentation for biomedical NLP tasks including Named Entity Recognition and sentence classification.
  ☆10Updated 4 years ago
• simonlevine / clinical-longformer
  ☆38Updated 3 years ago
• Machine-Learning-for-Medical-Language / cnlp_transformers
  Transformers for Clinical NLP
  ☆25Updated last month
• ncbi-nlp / BioWordVec
  ☆152Updated last year
• medspacy / medspacy
  Library for clinical NLP with spaCy.
  ☆598Updated last month
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆80Updated 3 years ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆29Updated last year
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• beamandrew / cui2vec
  ☆55Updated 5 years ago