Alternatives and similar repositories for libChEBIpy

Users that are interested in libChEBIpy are comparing it to the libraries listed below

• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆35Updated last month
• mwang87 / NP-Classifier
  ☆24Updated 8 months ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆21Updated 7 months ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆50Updated last week
• tyo-nu / MINE-Database
  Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic
  ☆19Updated last year
• ablab / npdtools
  Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…
  ☆28Updated 2 years ago
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• matthiaskoenig / brendapy
  BRENDA parser in python
  ☆22Updated 3 years ago
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆29Updated last month
• protwis / protwis
  Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…
  ☆41Updated last month
• LeidelLab / SMITER
  Synthetic mzML writer
  ☆13Updated 3 months ago
• mandelbrot-project / memo
  Ms2 basEd saMple vectOrization (memo) package
  ☆17Updated 2 years ago
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated 6 months ago
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆32Updated 3 years ago
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆49Updated 3 months ago
• JamesJeffryes / pyclassyfire
  A python client for the ClassyFire API
  ☆16Updated 5 years ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated 11 months ago
• pnnl / MSAC
  ☆23Updated 3 months ago
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆15Updated 6 months ago
• idslme / IDSL_MINT
  A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
  ☆23Updated last year
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆55Updated 11 months ago
• HUPO-PSI / mzML
  Repository for mzML and the corresponding examples
  ☆30Updated last year
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆45Updated last month
• XiminHu / mass-suite
  ☆26Updated last year
• pybel / pybel
  🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
  ☆135Updated last year
• ipb-halle / MetFragRelaunched
  Relaunch of the initial MetFrag project.
  ☆18Updated last week
• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆16Updated last year
• pnnl / darkchem
  ☆32Updated 6 months ago
• kaibioinfo / canopus_treemap
  CANOPUS visualization for Jupyter notebook
  ☆20Updated 3 years ago
• hcji / DeepMASS
  A known-to-unknown metabolite identification workflow
  ☆20Updated 4 years ago