Alternatives and similar repositories for libChEBIpy

Users that are interested in libChEBIpy are comparing it to the libraries listed below

• pybel / pybel
  🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
  ☆137Updated last year
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆36Updated 7 months ago
• EBI-Metabolights / MetaboLights
  MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and cover…
  ☆23Updated last month
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆58Updated 2 weeks ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆24Updated last year
• ipb-halle / MetFragRelaunched
  Relaunch of the initial MetFrag project.
  ☆19Updated last week
• matthiaskoenig / brendapy
  BRENDA parser in python
  ☆22Updated 3 years ago
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆39Updated last week
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆130Updated last month
• mwang87 / NP-Classifier
  ☆27Updated 2 weeks ago
• protwis / protwis
  Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…
  ☆43Updated last week
• sirius-ms / sirius-libs
  sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java
  ☆54Updated last year
• matchms / matchms
  Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.
  ☆242Updated last week
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆55Updated 2 weeks ago
• eMetaboHUB / Forum-DiseasesChem
  A Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases.
  ☆16Updated last year
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆71Updated 3 weeks ago
• bittremieuxlab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆33Updated 2 months ago
• pnnl / MSAC
  ☆23Updated 9 months ago
• SBRG / ssbio
  A Python framework for structural systems biology
  ☆110Updated 5 years ago
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆34Updated this week
• idslme / IDSL_MINT
  A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
  ☆27Updated last year
• chembl / chembl_webservices_2
  Source code of the ChEMBL web services.
  ☆17Updated 6 years ago
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆19Updated last year
• EMSL-Computing / CoreMS
  CoreMS is a comprehensive mass spectrometry software framework
  ☆62Updated 2 months ago
• sebotic / cdk_pywrapper
  A Python wrapper for the Chemistry Development Kit (CDK)
  ☆38Updated 3 months ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated last month
• ablab / npdtools
  Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…
  ☆29Updated 3 years ago
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆18Updated 2 years ago
• LeidelLab / SMITER
  Synthetic mzML writer
  ☆13Updated 9 months ago
• berlinguyinca / spectra-hash
  The splash, this is the reference documentation
  ☆25Updated 2 years ago