Alternatives and similar repositories for Swiss_covid_Re

Users that are interested in Swiss_covid_Re are comparing it to the libraries listed below

• reconhub / trendbreaker
  Analysing epidemic trends using AutoML approaches.
  ☆18Updated 4 years ago
• goldingn / covid19_australia_interventions
  Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia
  ☆13Updated 2 years ago
• WHO-Collaboratory / collaboratory-epiparameter-community
  ☆41Updated last month
• ekenah / TranStat
  An R package for the analysis of infectious disease transmission data
  ☆10Updated 3 years ago
• idem-lab / conmat
  Create Contact Matrices from Population Data
  ☆20Updated 2 months ago
• adamkucharski / 2020-cov-tracing
  Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…
  ☆13Updated 2 years ago
• mhoehle / STA427_SM4IDE
  Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH
  ☆19Updated 3 years ago
• calumdavey / RUG
  Repo for the LSHTM R Users Group (RUG)
  ☆9Updated 3 years ago
• cran-task-views / Epidemiology
  CRAN Task View: Epidemiology
  ☆23Updated 3 weeks ago
• nfidd / nfidd
  Course on nowcasting and forecasting of infectious disease dynamics
  ☆19Updated 2 weeks ago
• mrc-ide / epireview
  ☆30Updated this week
• R4EPI / sitrep
  Report templates and helper functions for applied epidemiology
  ☆42Updated 4 months ago
• athowes / thesis
  Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)
  ☆16Updated 6 months ago
• WHO-Collaboratory / collaboratory-epipipeline-community
  ☆14Updated last year
• bcgov / epi.branch.sim
  Stochastic epidemiological branching simulation
  ☆10Updated 4 years ago
• objornstad / ecomodelmarkdowns
  Stand alone markdowns with embedded shiny apps for various eco&epi models
  ☆23Updated 2 years ago
• socialcontactdata / contactdata
  R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)
  ☆9Updated last week
• nicsteyn2 / NZWastewaterModelling
  ☆10Updated 9 months ago
• covidestim / covidestim
  Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States
  ☆27Updated last month
• epiforecasts / inc2prev
  Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
  ☆17Updated last year
• andrewheiss / ath-hugo
  Code and content for andrewheiss.com
  ☆27Updated 2 years ago
• covid-19-Re / estimateR
  R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic
  ☆11Updated 10 months ago
• nicholasjclark / portal_VAR
  R code to replicate analyses in Clark et al 2025 (Beyond single-species models: leveraging multispecies forecasts to navigate the dynamic…
  ☆14Updated 4 months ago
• cdcepi / WNV-forecast-project-2023
  Data and forecast submission repository for the 2023 CDC West Nile virus Forecasting Challenge
  ☆11Updated last year
• thisisnic / docreview
  An opinionated package for enhancing your R package documentation.
  ☆17Updated last year
• gkonstantinoudis / ExcessDeathsCOVID
  Excess deaths due to COVID-19 pandemic in 2020
  ☆11Updated 3 years ago
• rosannaclairebarnard / covidm-mtd-Omi
  Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…
  ☆12Updated 2 years ago
• richardli / SUMMER
  SAE Unit/area Models and Methods for Estimation in R
  ☆23Updated last month
• ProjectMOSAIC / NHANES
  R package containing versions of NHANES data
  ☆11Updated 7 years ago
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆30Updated 10 months ago