iramosgutierrez / phyloshapeRLinks
Package to plot phylogenies with custom shapes
☆24Updated last year
Alternatives and similar repositories for phyloshapeR
Users that are interested in phyloshapeR are comparing it to the libraries listed below
Sorting:
- Species occurrence dot maps in R☆21Updated 3 years ago
- Machuruku☆32Updated 4 months ago
- Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…☆25Updated 3 years ago
- A Landscape Genomic Analysis Toolkit in R☆19Updated this week
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆67Updated 2 months ago
- A program for multimodel inference on speciation and trait evolution☆33Updated 7 years ago
- R Interfaces to Phylogenetic Software☆12Updated 3 months ago
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- JAMP - Just Another Metabarcoding Pipeline☆35Updated 3 years ago
- Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool☆19Updated 6 years ago
- Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)☆12Updated 2 years ago
- Reconstruct Ancestral State in Phylogenies☆21Updated last year
- R tools for integrating phylogenies and ecology☆35Updated last year
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated 11 months ago
- PHYLOgenomic analysis pipeline for HERBarium specimens☆17Updated last month
- TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data☆22Updated 2 years ago
- creating reference databases for amplicon sequencing☆38Updated 2 months ago
- rtrees: an R package to assemble phylogenetic trees from mega-trees☆34Updated last month
- Python version of PHLAWD☆21Updated 7 months ago
- Phylogenetic penalized likelihood☆48Updated 2 weeks ago
- the hierfstat package☆24Updated 6 months ago
- Standardized and Automated MetaBarcoding Analyses workflow (Mirror)☆12Updated last year
- An open database of vertebrate-virus interactions☆40Updated last week
- Access sequences from the 1000 Plant Initiative (1KP)☆13Updated 2 years ago
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆25Updated last month
- ☆21Updated 2 years ago
- A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop☆15Updated 4 years ago
- An R Package to build and simulate coalescent models☆20Updated last year
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆15Updated 4 months ago
- An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.☆13Updated this week