Package to plot phylogenies with custom shapes
☆24Apr 17, 2024Updated 2 years ago
Alternatives and similar repositories for phyloshapeR
Users that are interested in phyloshapeR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆33Jun 1, 2022Updated 3 years ago
- visualization of phylogenetic output files☆14Oct 23, 2023Updated 2 years ago
- Spatio-temporal trends in habitat suitability from ecological niche models☆14Feb 4, 2026Updated 2 months ago
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Mar 18, 2022Updated 4 years ago
- download CHELSA climate data☆10Oct 28, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Calculate the dn/ds (also pn and ps) value of cds☆14Jul 11, 2020Updated 5 years ago
- Pipeline for homeobox gene identification☆11Aug 8, 2023Updated 2 years ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆35Feb 4, 2026Updated 2 months ago
- SYNPHONI is a tool designed for reconstructing the dynamic evolution of syntenic relationships across all scales of phylogenetic distance…☆12May 7, 2023Updated 2 years ago
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated last year
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Mar 23, 2026Updated 3 weeks ago
- An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.☆16Aug 20, 2025Updated 7 months ago
- A Landscape Genomic Analysis Toolkit in R☆22Nov 18, 2025Updated 5 months ago
- Multi-genome synteny block visualization tool☆57Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Companion code for Grenié et al. 2022 MEE "Harmonizing taxon names in biodiversity data: a review of tools, databases, and best practice…☆15Mar 17, 2026Updated last month
- Preparation of species occurrences and distribution data for the use in phylogenetic analyses. SpeciesgeocodeR is built for data explorat…☆23Aug 31, 2023Updated 2 years ago
- Dispersal simulations based on ecological niches☆16Dec 7, 2023Updated 2 years ago
- Machuruku☆32Jan 20, 2025Updated last year
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated 3 months ago
- Estimating gene family turnover rates by likelihood-based methods☆12Aug 17, 2020Updated 5 years ago
- Codon-Aware Multiple Sequence Alignments☆20Nov 15, 2024Updated last year
- A {rayshader} plugin providing a spatial framework and convenience functions for acessing and translating spatial data☆23Nov 18, 2024Updated last year
- My submissions to the #30DayMapChallenge 2021☆15Jan 12, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Wrapper function for 'inlabru' for modeling species distribution models from disparate datasets.☆27Jan 30, 2026Updated 2 months ago
- QGIS Plugin for OGC Web Feature Service 2.0.0☆12Dec 5, 2025Updated 4 months ago
- nf-test utility functions☆12Mar 5, 2026Updated last month
- mPTP - a tool for single-locus species delimitation☆30Mar 14, 2026Updated last month
- Local alignment search with k-bounded matching statistics.☆22Aug 19, 2025Updated 8 months ago
- Repositorio de GitHub con scripts de visualizaciones de datos en R. Incluye gráficos de barras, líneas, dispersión, anillos, mapas, árbol…☆11Mar 22, 2026Updated 3 weeks ago
- A couple of tools I find indispensable for post orthomcl down-stream analysis.☆11Oct 2, 2019Updated 6 years ago
- Tools for Modeling Niches and Distributions of Species☆27Aug 19, 2025Updated 8 months ago
- Infering ancestral synteny with hierarchical orthologous groups☆38Oct 17, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A catalog of R graphics and the R code used to produce them☆18Aug 8, 2022Updated 3 years ago
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆17May 27, 2024Updated last year
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆23Nov 21, 2023Updated 2 years ago
- Cost-efficient genome-wide gene expression profiling☆16Dec 2, 2022Updated 3 years ago
- Reference genome quality scores☆20Dec 17, 2020Updated 5 years ago
- cross-species analysis of cell identities, markers and regulations☆12Jul 11, 2025Updated 9 months ago
- Demographic inference from whole genomes☆13Oct 18, 2022Updated 3 years ago