Alternatives and similar repositories for phyloshapeR:

Users that are interested in phyloshapeR are comparing it to the libraries listed below

• wtesto / SpeciesOccurrenceMapping
  Species occurrence dot maps in R
  ☆21Updated 2 years ago
• nmatzke / BioGeoBEARS
  BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts
  ☆63Updated 4 months ago
• wxguillo / machuruku
  Machuruku
  ☆31Updated last month
• TheWangLab / algatr
  A Landscape Genomic Analysis Toolkit in R
  ☆15Updated 3 weeks ago
• heibl / ips
  R Interfaces to Phylogenetic Software
  ☆11Updated this week
• lmcai / PhyloHerb
  PHYLOgenomic analysis pipeline for HERBarium specimens
  ☆17Updated last year
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated 7 months ago
• HullUni-bioinformatics / metaBEAT
  Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool
  ☆19Updated 5 years ago
• fkeck / phylosignal
  Exploring the Phylogenetic Signal in Continuous Traits
  ☆16Updated last year
• mrborges23 / delta_statistic
  Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…
  ☆25Updated 3 years ago
• blackrim / treePL
  Phylogenetic penalized likelihood
  ☆47Updated 6 months ago
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆33Updated 7 years ago
• GuillemSalazar / EcolUtils
  Utilities for community ecology analysis
  ☆18Updated 4 years ago
• danlwarren / Evolution-2019-Phylogenetic-Methods-Workshop
  This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Provid…
  ☆13Updated 5 years ago
• bensutherland / eDNA_metabarcoding
  Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)
  ☆12Updated 2 years ago
• mahsa-mousavi / eDNAFlow
  ☆20Updated last year
• ptitle / epm
  An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.
  ☆13Updated 2 weeks ago
• cecileane / iBPP
  Bayesian species delimitation integrating genes and traits
  ☆12Updated 3 years ago
• Tom-Jenkins / mapmixture
  R package and web app for spatial visualisation of admixture on a projected map
  ☆42Updated 2 weeks ago
• gehara / PipeMaster
  An R Package to build and simulate coalescent models
  ☆19Updated 10 months ago
• daijiang / rtrees
  rtrees: an R package to assemble phylogenetic trees from mega-trees
  ☆32Updated 8 months ago
• ropensci / bold
  Interface to the Bold Systems barcode webservice
  ☆18Updated last month
• metabaRfactory / metabaR
  metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.
  ☆14Updated 2 weeks ago
• bodkan / demografr
  Fast and simple simulation-based population genetic inference in R
  ☆27Updated this week
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated last year
• VascoElbrecht / JAMP
  JAMP - Just Another Metabarcoding Pipeline
  ☆32Updated 3 years ago
• yoann-dufresne / SLIM
  A web app for environmental DNA metabarcoding analysis
  ☆10Updated 3 years ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated 3 months ago
• bcbc-group / Botany2020NMGWorkshop
  A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop
  ☆15Updated 4 years ago