Alternatives and similar repositories for dcc-portal

Users that are interested in dcc-portal are comparing it to the libraries listed below

• marcos-diazg / musica
  MuSiCa - Mutational Signatures in Cancer
  ☆23Updated last year
• oncojs / lolliplot
  Chart to aid in understanding mutations and their location on a gene.
  ☆22Updated 2 years ago
• epiviz / epiviz
  EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…
  ☆71Updated 2 years ago
• phenopolis / phenopolis
  An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data
  ☆33Updated 3 years ago
• NCBI-Hackathons / Pharmacogenomics_Prediction_Pipeline_P3
  ☆28Updated 6 years ago
• YeoLab / qtools
  qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python
  ☆21Updated 2 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• DataBiosphere / data-explorer
  ☆11Updated 2 years ago
• iVis-at-Bilkent / pathway-mapper
  PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
  ☆59Updated last year
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated 2 years ago
• raphael-group / magi
  A web application from the Raphael Lab for mutation annotation and genome interpretation.
  ☆20Updated 7 years ago
• sbg / sevenbridges-python
  SevenBridges Python Api bindings
  ☆46Updated 7 months ago
• BioinformaticsFMRP / TCGAbiolinksGUI
  TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/
  ☆36Updated 4 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• hubmapconsortium / portal-ui
  HuBMAP Data Portal front end
  ☆13Updated this week
• hammerlab / cohorts
  Utilities for analyzing mutations and neoepitopes in patient cohorts
  ☆20Updated 7 years ago
• LinkageIO / Camoco
  Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.
  ☆43Updated 2 years ago
• KarchinLab / SCHISM
  Subclonal Hierarchy Inference from Somatic Mutations
  ☆21Updated 6 months ago
• Genomon-Project / paplot
  paplot creates various dynamic and interactive reports for cancer genome analysis.
  ☆25Updated 2 years ago
• shenlab-sinai / region_analysis
  A python script used to annotate genomic intervals.
  ☆18Updated 5 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 7 years ago
• SnakeChunks / SnakeChunks
  Modular blocks to build Snakemake workflows for reproducible NGS analyses
  ☆22Updated 6 years ago
• common-workflow-lab / gxargparse
  Automated CWL and Galaxy XML generation for Python tools that use argparse and click
  ☆11Updated 6 years ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆16Updated 3 months ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆45Updated 2 years ago
• Bioconductor / UseBioconductor
  Training material for intermediate R / Bioconductor courses
  ☆17Updated 2 years ago
• bhklab / PharmacoDB
  Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.
  ☆46Updated 7 years ago
• Steven-N-Hart / VariantDB_Challenge
  Finding a scalable alternative to the VCF File for genomics analysis
  ☆14Updated 8 years ago
• NCBI-Hackathons / rnaseqview
  RNA-seq Viewer Team at the NCBI-assisted Boston Genomics Hackathon
  ☆37Updated 8 years ago