Anatomy-aware Spatial Imputation Graphic Network for 3D Spatial Transcriptomics
☆26Jun 28, 2025Updated last year
Alternatives and similar repositories for ASIGN
Users that are interested in ASIGN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multi-Level Attention Graph Network for High-Resolution Spatial Transcriptomics [MIDL2025]☆13Oct 21, 2025Updated last year
- ☆53May 19, 2025Updated last year
- ☆37Jul 18, 2025Updated last year
- [AAAI 2025] M2OST: Many-to-one Regression for Predicting Spatial Transcriptomics from Digital Pathology Images☆15Dec 1, 2025Updated 11 months ago
- This is the PyTorch implementation of the paper ''STINR: Deciphering Spatial Transcriptomics via Implicit Neural Representation'' (CVPR 2…☆24Mar 26, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- [ICLR 2025] Stem: Gene Expression Inference from Histology Images☆55Apr 15, 2025Updated last year
- Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching, ICML2025 (Spotlight)☆38Aug 11, 2025Updated last year
- Deep learning on histopathology images.☆150Sep 8, 2021Updated 5 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆90Oct 22, 2024Updated 2 years ago
- ☆16Apr 11, 2026Updated 6 months ago
- A large scale benchmark for cross-modal learning of histology and spatial expressions☆24Oct 28, 2025Updated last year
- [NeurIPS 2025] Few-Shot Learning from Gigapixel Images via Hierarchical Vision-Language Alignment and Modeling☆26Aug 5, 2026Updated 2 months ago
- STPath: A Generative Foundation Model for Integrating Spatial Transcriptomics and Whole Slide Images☆54Jul 27, 2025Updated last year
- Awesome generative spatial omics tools☆35Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆16Oct 1, 2023Updated 3 years ago
- MICCAI 2025 | MiCo: Multiple Instance Learning with Context-Aware Clustering for Whole Slide Image Analysis☆11Jan 17, 2026Updated 9 months ago
- ☆11Sep 2, 2026Updated 2 months ago
- ☆14Jun 6, 2024Updated 2 years ago
- Exemplar Guided Deep Neural Network for Spatial Transcriptomics Analysis of Gene Expression Prediction☆22Oct 20, 2023Updated 3 years ago
- ☆76Sep 16, 2025Updated last year
- PS3: A Multimodal Transformer Integrating Pathology Reports with Histology Images and Biological Pathways for Cancer Survival Prediction☆10Jun 28, 2026Updated 4 months ago
- [Briefings in Bioinformatics 2025] A GCN and pathology image large model-based method to predict single-cell resolution spatial gene expr…☆27Dec 1, 2025Updated 11 months ago
- PyTorch implementation of HisToGene☆58Nov 30, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆23Feb 5, 2025Updated last year
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆105Updated this week
- ST-Align: A Multimodal Foundation Model for Image-Gene Alignment in Spatial Transcriptomics☆11Dec 27, 2024Updated last year
- ☆91Jun 2, 2026Updated 5 months ago
- Hierarchical Deep Multiple Instance Learning☆13Jun 30, 2023Updated 3 years ago
- ☆65Apr 26, 2022Updated 4 years ago
- ☆32Mar 15, 2024Updated 2 years ago
- [ICLR 2024]Implementation of "Prototypical Information Bottlenecking and Disentangling for Multimodal Cancer Survival Prediction"☆85May 5, 2024Updated 2 years ago
- ☆35Jun 18, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆52Oct 22, 2025Updated last year
- ☆49May 31, 2024Updated 2 years ago
- ☆19Mar 31, 2026Updated 7 months ago
- Her2 Breast Cancer Project☆114Nov 27, 2022Updated 3 years ago
- tutorials for spateo package☆21Dec 25, 2024Updated last year
- Pathformer: biological pathway informed transformer model☆40Dec 27, 2023Updated 2 years ago
- Essential Python skills for using transformers on Colab☆11May 13, 2022Updated 4 years ago