evolgeniusteam / R-for-bioinformaticsLinks
R course for bioinformatics
โ57Updated 10 months ago
Alternatives and similar repositories for R-for-bioinformatics
Users that are interested in R-for-bioinformatics are comparing it to the libraries listed below
Sorting:
- Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.โ206Updated last month
- ๐ฌ Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.โ184Updated 4 years ago
- Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.โ274Updated this week
- Discovering known and novel miRNAs from small RNA sequencing dataโ153Updated 11 months ago
- A companion R package for the MicrobiomeAnalyst web serverโ127Updated 2 months ago
- Solutions to Rosalind Bioinformatics Problemsโ72Updated 11 years ago
- โ135Updated 5 years ago
- Web application to explore the Sequence Read Archive.โ219Updated last month
- Download FASTQ files from SRA or ENA repositories.โ340Updated 2 months ago
- The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/โ98Updated 3 years ago
- A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysiโฆโ138Updated 3 months ago
- Short lessons from FAS Informatics coffee hourโ152Updated 2 years ago
- โ20Updated 6 years ago
- Analyzing and visualizing KEGG information using the grammar of graphicsโ232Updated 4 months ago
- โ38Updated last year
- Pathogen NGS Documentaryโ148Updated last year
- RNA-Seq analysis workflowโ104Updated 4 years ago
- Tool for plotting sequencing data along genomic coordinates.โ308Updated last month
- Step-by-step analysis pipeline for RNA-seq dataโ138Updated last year
- website for the rnaseq courseโ106Updated last month
- A collection of scripts and notes related to genomics and bioinformaticsโ215Updated last month
- Check strandedness of RNA-Seq fastq filesโ125Updated 2 years ago
- Reference-guided transcript discovery and quantification for long read RNA-Seq dataโ215Updated this week
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependenciesโ166Updated 3 months ago
- A short tutorial on how to use RSEMโ138Updated 5 years ago
- Metagenome analysis pipelineโ99Updated 4 years ago
- parallel fastq-dump wrapperโ299Updated 2 years ago
- โ154Updated 2 years ago
- Generate IGV style locus tracks from bigWig files in Rโ167Updated 9 months ago
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-trainingโ48Updated last month