berenslab / RFEst
A Python 3 toolbox for neural receptive field estimation using splines and Gaussian priors.
☆25Updated 8 months ago
Alternatives and similar repositories for RFEst:
Users that are interested in RFEst are comparing it to the libraries listed below
- Dimensionality reduction of spikes trains☆49Updated 3 years ago
- YASS: Yet Another Spike Sorter☆66Updated 2 years ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆95Updated this week
- ☆51Updated 2 years ago
- Deconvolution of calcium imaging data☆93Updated 3 months ago
- latent manifold tuning model / P-GPLVM☆12Updated 5 years ago
- Recordings of 10k neurons during spontaneous behaviors☆51Updated last year
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18☆28Updated 6 years ago
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 7 years ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆51Updated 2 months ago
- A class for using ML algorithms for spike prediction☆60Updated 7 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆66Updated last year
- Pytorch implementation of lfads, and hierarchical extension☆26Updated 3 years ago
- Coding exercises for Neural Data Science at CSHL in 2019☆29Updated 5 years ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆39Updated last month
- Pytorch implementation of LocaNMF☆35Updated 5 years ago
- ☆21Updated 6 months ago
- Recurrent Switching Linear Dynamical Systems☆109Updated 2 years ago
- IBL core shared libraries☆63Updated last week
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated 7 months ago
- Density estimation likelihood-free inference. No longer actively developed see https://github.com/mackelab/sbi instead☆73Updated 4 years ago
- Dynamical Components Analysis☆32Updated last year
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆49Updated 3 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆38Updated 5 years ago
- Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.☆39Updated 2 years ago
- Tutorial☆10Updated 4 years ago
- Toolbox for analyzing behavioral videos and neural activity☆59Updated last year
- Shareable, interactive scientific figures in the cloud☆35Updated 5 months ago