Learning cellular hierarchy from scRNAseq data
☆12Oct 3, 2024Updated 2 years ago
Alternatives and similar repositories for CATCH
Users that are interested in CATCH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is the official repository for DiPro, highlighted as a Spotlight at NeurIPS 2025.☆19Nov 7, 2025Updated 11 months ago
- [MICCAI 2024] CUTS: A Deep Learning and Topological Framework for Multigranular Unsupervised Medical Image Segmentation☆21Feb 14, 2026Updated 8 months ago
- Creating multi-resolution embeddings and clusters from high dimensional data☆59Sep 27, 2024Updated 2 years ago
- Homepage for YuLab-SMU☆14Oct 8, 2026Updated last week
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆24Jan 16, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- 💤 Relaxation labelling to refine edge detection 💤☆11Jul 29, 2019Updated 7 years ago
- Ordering gene-expression and functional events in single-cell experiments☆33Jul 6, 2026Updated 3 months ago
- QDSpy - a Python software for scripting and presenting stimuli for visual neuroscience.☆12Sep 25, 2026Updated 3 weeks ago
- R package to explore active transposable elements with RNA-seq data☆20Nov 25, 2022Updated 3 years ago
- A developed pipeline for expressed endogenous retrovirus identification.☆17Oct 9, 2024Updated 2 years ago
- a rust library for high throughput binary encoding of genomic sequences☆12Aug 26, 2026Updated last month
- CompBioBench: A benchmark of 100 diverse, verifiable questions for agents for computational biology (scripts for running agents)☆52Apr 6, 2026Updated 6 months ago
- Benchmark and analysis of 165 pretrained SSL models. Code for "Evaluating Self-Supervised Learning via Risk Decomposition".☆14Jul 26, 2023Updated 3 years ago
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 7 years ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 6 years ago
- Visual bag of words for fast image matching☆25Apr 27, 2023Updated 3 years ago
- Code to reproduce analyses and figures for Kamath et al., 2022☆13May 5, 2022Updated 4 years ago
- Tutorials on using latest dynamo package☆28Jul 1, 2026Updated 3 months ago
- An arbitrary-spectrum spatial visual stimulator for vision research☆21Dec 6, 2023Updated 2 years ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆36Apr 13, 2021Updated 5 years ago
- sharing interactive single cell gene expression visualizations from Seurat☆13May 18, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Some python functions to supplement the NEURON python module☆28Jun 25, 2019Updated 7 years ago
- ☆13Dec 14, 2023Updated 2 years ago
- ☆16Jan 7, 2025Updated last year
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Sep 21, 2024Updated 2 years ago
- This repository includes the introduction to uncertain label in Chest X-Ray diagnosis.☆10Oct 20, 2024Updated last year
- SCATE: Single-cell ATAC-seq Signal Extraction and Enhancement☆10Oct 15, 2020Updated 6 years ago
- Simplified script for applying the t-SNE diff method on high parameter flow cytometry data☆10Oct 31, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Client Access to Hyperledger Fabric Blockchain Network through Restful API's☆11Apr 13, 2022Updated 4 years ago
- R package for computing Association Plots☆17Nov 4, 2024Updated last year
- Latent spaces for single cells☆20Oct 31, 2023Updated 2 years ago
- [𝗜𝗖𝗠𝗟 𝟮𝟬𝟮𝟲] Dispersion loss counteracts embedding condensation and improves generalization in small language models☆21May 21, 2026Updated 4 months ago
- Dot2dot: Accurate Whole-Genome Tandem Repeats Discovery☆11Oct 5, 2022Updated 4 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆25Nov 6, 2025Updated 11 months ago
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 7 years ago