Learning cellular hierarchy from scRNAseq data
☆12Oct 3, 2024Updated 2 years ago
Alternatives and similar repositories for CATCH
Users that are interested in CATCH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [MICCAI 2024] CUTS: A Deep Learning and Topological Framework for Multigranular Unsupervised Medical Image Segmentation☆21Feb 14, 2026Updated 8 months ago
- This is the official repository for DiPro, highlighted as a Spotlight at NeurIPS 2025.☆19Nov 7, 2025Updated last year
- Package for including repetitive regions in peak calling from ChIP-seq datasets☆11Nov 6, 2025Updated last year
- Homepage for YuLab-SMU☆14Nov 3, 2026Updated last week
- 💤 Relaxation labelling to refine edge detection 💤☆11Jul 29, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Creating multi-resolution embeddings and clusters from high dimensional data☆59Sep 27, 2024Updated 2 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆24Jan 16, 2024Updated 2 years ago
- ☆12Jan 29, 2026Updated 9 months ago
- Locating X-ray coronary angiogram keyframes via long short-term spatiotemporal attention with image-to-patch contrastive learning☆11Jul 4, 2023Updated 3 years ago
- QDSpy - a Python software for scripting and presenting stimuli for visual neuroscience.☆12Oct 23, 2026Updated 2 weeks ago
- A developed pipeline for expressed endogenous retrovirus identification.☆17Oct 9, 2024Updated 2 years ago
- a rust library for high throughput binary encoding of genomic sequences☆12Oct 27, 2026Updated last week
- Ordering gene-expression and functional events in single-cell experiments☆33Jul 6, 2026Updated 4 months ago
- CompBioBench: A benchmark of 100 diverse, verifiable questions for agents for computational biology (scripts for running agents)☆52Apr 6, 2026Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A pip-installable evaluator for GANs (IS and FID). Accepts either dataloaders or individual batches. Supports on-the-fly evaluation durin…☆11Apr 11, 2023Updated 3 years ago
- Code for MICCAI 2022 paper, CheXRelNet: An Anatomy-Aware Model for Tracking Longitudinal Relationships between Chest X-Rays☆10Aug 14, 2022Updated 4 years ago
- R package to explore active transposable elements with RNA-seq data☆20Nov 25, 2022Updated 3 years ago
- [EMBC 2022] Official Implementation for "Self-supervised Assisted Active Learning for Skin Lesion Segmentation"☆16Jul 21, 2022Updated 4 years ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 6 years ago
- To enhance the nonlinearity of neural networks and increase their mapping abilities between the inputs and response variables, activation…☆18Feb 20, 2024Updated 2 years ago
- Official implementation of XLIP: Cross-modal Attention Masked Modelling for Medical Language-Image Pre-Training☆10Apr 22, 2025Updated last year
- This is the implementation of the paper: Addressing Asynchronicity in Clinical Multimodal Fusion via Individualized Chest X-ray Generati…☆11Apr 22, 2026Updated 6 months ago
- An arbitrary-spectrum spatial visual stimulator for vision research☆21Dec 6, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A tensorflow implementation for Unsupervised vessel segmentation based on ADDA☆16Jan 21, 2020Updated 6 years ago
- An R package that integrates the installation, execution, and benchmark of cutting-edge computational doublet-detection methods.☆12Dec 4, 2022Updated 3 years ago
- Some python functions to supplement the NEURON python module☆28Jun 25, 2019Updated 7 years ago
- Benchmark and analysis of 165 pretrained SSL models. Code for "Evaluating Self-Supervised Learning via Risk Decomposition".☆14Jul 26, 2023Updated 3 years ago
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 7 years ago
- Examples on how to use the karyoploteR R/Bioconductor package☆12Feb 3, 2023Updated 3 years ago
- ☆10Mar 10, 2026Updated 8 months ago
- Official repository for "C-DARL: Contrastive diffusion adversarial representation learning for label-free blood vessel segmentation"☆19Nov 15, 2023Updated 2 years ago
- Visual bag of words for fast image matching☆25Apr 27, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A model-independent chemistry module for atmosphere models☆10Updated this week
- Code to reproduce analyses and figures for Kamath et al., 2022☆13May 5, 2022Updated 4 years ago
- Tutorials on using latest dynamo package☆28Jul 1, 2026Updated 4 months ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 8 years ago
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- ☆13Dec 14, 2023Updated 2 years ago
- Latent spaces for single cells☆20Oct 31, 2023Updated 3 years ago
Are these results useful?