trislaz / wsi_mil

Related projects ⓘ

Alternatives and complementary repositories for wsi_mil

• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆47Updated 2 months ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆64Updated 9 months ago
• vqdang / H2T
  ☆36Updated last year
• georg-wolflein / pathology-foundation-models
  List of pathology feature extractors and foundation models
  ☆58Updated last week
• KatherLab / HIA
  Histopathology Image Analysis
  ☆91Updated last year
• taliq / TEA-graph
  First commit
  ☆58Updated 2 years ago
• KatherLab / marugoto
  Tools to build deep learning pipelines.
  ☆85Updated last week
• PathologyDataScience / HiPS
  Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
  ☆18Updated 7 months ago
• mahmoodlab / PANTHER
  Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024
  ☆95Updated 2 months ago
• wenqi006 / SlideGraph
  ☆49Updated 2 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆34Updated 10 months ago
• Biooptics2021 / PathFinder
  ☆45Updated last year
• smujiang / WSITools
  Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…
  ☆44Updated 2 weeks ago
• agentdr1 / LA_MIL
  Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch
  ☆23Updated last year
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆49Updated last week
• AIRMEC / HECTOR
  Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.
  ☆32Updated 5 months ago
• choosehappy / HoverFast
  Blazing fast nuclei segmentation for brightfield Whole Slide Images
  ☆29Updated last month
• mahmoodlab / Patch-GCN
  Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021
  ☆126Updated 6 months ago
• qinghezeng / Histo2GeneSignatures
  Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images
  ☆20Updated 4 months ago
• wangxiaodong1021 / HCC_Prognostic
  Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning
  ☆41Updated 3 years ago
• MarvinLer / SparseConvMIL
  Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification | https://arxiv.org/abs/2105.02726
  ☆26Updated 3 years ago
• clemsgrs / hs2p
  Histopathology Slides Preprocessing Pipeline
  ☆32Updated 2 months ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆35Updated last year
• KatherLab / end2end-WSI-preprocessing
  End-to-end pipeline to go from raw H&E slides to normalised extracted features for training
  ☆23Updated 8 months ago
• Cassie07 / Review_Molecular_profile_prediction_GNN
  [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…
  ☆25Updated last year
• impromptuRong / hd_wsi
  ☆23Updated 2 weeks ago
• lucasrla / wsi-preprocessing
  Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
  ☆49Updated last year
• trislaz / gigassl
  Repository for the Giga-SSL paper
  ☆20Updated last month
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆31Updated last year
• Path-AI / hif2gene
  Data and code to accompany our Nature publication
  ☆43Updated 2 years ago