Alternatives and similar repositories for ncbi-disease

Users that are interested in ncbi-disease are comparing it to the libraries listed below

• BaderLab / Biomedical-Corpora
  A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…
  ☆36Updated 6 years ago
• hu-ner / huner
  Named Entity Recognition for biomedical entities
  ☆47Updated 2 years ago
• stylerw / thymedata
  This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…
  ☆37Updated last month
• kingsaint / BioMedical-EL
  Fast and Effective Biomedical Entity Linking Using a Dual Encoder
  ☆19Updated 3 years ago
• svjan5 / medtype
  MedType: Improving Medical Entity Linking with Semantic Type Prediction
  ☆116Updated 2 years ago
• spyysalo / standoff2conll
  Conversion from brat-flavored standoff to CoNLL format
  ☆52Updated 4 years ago
• bepnye / EBM-NLP
  ☆90Updated 5 years ago
• wglassly / cnnormaliztion
  For icibm paper
  ☆11Updated 8 years ago
• BaderLab / Transfer-Learning-BNER-Bioinformatics-2018
  This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…
  ☆37Updated 6 years ago
• shreyashub / BioFLAIR
  BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks
  ☆42Updated 5 years ago
• danlou / MedLinker
  ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching
  ☆29Updated 2 years ago
• jennydsuza9 / disorder-normalizer
  A system for normalizing disorder mentions in biomedical data.
  ☆19Updated 9 years ago
• abachaa / MEDIQA2019
  Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019
  ☆51Updated 2 years ago
• bionlp-hzau / BioNLP-Corpus
  Repository used to collect biomedical corpus on the Internet!
  ☆35Updated 4 years ago
• rubenkruiper / FOBIE
  FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.
  ☆35Updated 5 years ago
• noc-lab / clinical_concept_extraction
  Clinical Concept Extraction with Contextual Word Embedding
  ☆40Updated 5 years ago
• yuzhimanhua / LM-LSTM-CRF
  ☆48Updated last year
• laituan245 / rescnn_bioel
  ☆25Updated 2 years ago
• wonjininfo / CollaboNet
  CollaboNet for Biomedical Named Entity Recognition
  ☆48Updated 6 years ago
• yuzhimanhua / Multi-BioNER
  Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)
  ☆135Updated 11 months ago
• Andy-jqa / bioelmo
  BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.
  ☆33Updated 5 years ago
• spyysalo / s800
  Tools for working with the S800 corpus
  ☆11Updated 4 years ago
• isegura / DDICorpus
  ☆35Updated 4 years ago
• UCDenver-ccp / CRAFT
  ☆73Updated last year
• ncbi-nlp / Ab3P
  Abbreviation definition dection library trained on PubMed abstracts
  ☆48Updated 4 years ago
• WenzhengZhang / EntQA
  Pytorch implementation of EntQA paper
  ☆64Updated 3 years ago
• datquocnguyen / BioPosDep
  Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)
  ☆33Updated 6 years ago
• geetickachauhan / relation-extraction
  Relation Extraction with Semeval 2010 data, i2b2 2010 VA challenge classification data and DDI extraction data.
  ☆19Updated 5 years ago
• MeRajat / SolvingAlmostAnythingWithBert
  BioBert Pytorch
  ☆116Updated 2 years ago
• IBM / gnn-taxo-construction
  A tool for taxonomy construction using Graph Neural Networks (GNN).
  ☆27Updated last month