The PatchCamelyon (PCam) deep learning classification benchmark.
☆515Jan 31, 2024Updated 2 years ago
Alternatives and similar repositories for pcam
Users that are interested in pcam are comparing it to the libraries listed below
Sorting:
- Roto-reflection equivariant CNNs for Keras as presented in B. S. Veeling, J. Linmans, J. Winkens, T. Cohen, M. Welling. "Rotation Equivar…☆86Dec 26, 2019Updated 6 years ago
- Program for the analysis and visualization of whole-slide images in digital pathology☆664Sep 12, 2023Updated 2 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Oct 3, 2023Updated 2 years ago
- Full package for applying deep learning to virtual slides.☆72Sep 7, 2018Updated 7 years ago
- An implementation of Unet for pytorch designed for digital pathology segmentation☆127Aug 23, 2022Updated 3 years ago
- Cancer metastasis detection with neural conditional random field (NCRF)☆760Oct 3, 2023Updated 2 years ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆175Apr 1, 2022Updated 3 years ago
- A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge☆208Mar 7, 2019Updated 6 years ago
- ☆346Nov 21, 2021Updated 4 years ago
- Two-Stage Convolutional Neural Network for Breast Cancer Histology Image Classification. ICIAR 2018 Grand Challenge on BreAst Cancer Hist…☆219Oct 23, 2019Updated 6 years ago
- Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma sli…☆511Jun 7, 2024Updated last year
- Python scripts for automatic Whole-Slide Image preprocessing.☆36May 18, 2021Updated 4 years ago
- A Python toolkit for pathology image analysis algorithms.☆465Updated this week
- Tools for tissue image stain normalisation and augmentation in Python 3☆348May 8, 2021Updated 4 years ago
- DeepLearning - Camelyon16 dataset☆129Oct 7, 2018Updated 7 years ago
- Deep Convolutional Gaussian Mixture Model for Stain-Color Normalization in Histopathological H&E Images☆83Aug 26, 2021Updated 4 years ago
- Our solution for ICIAR 2018 Grand Challenge☆193Dec 16, 2020Updated 5 years ago
- CNN based segmentation codes☆48Jan 19, 2023Updated 3 years ago
- This is the MATLAB code for stain separation and color normalization in computational pathology (histopathological images)☆70Mar 12, 2016Updated 9 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆111Nov 8, 2025Updated 3 months ago
- H&E histopathological staining normalization☆111Jan 24, 2020Updated 6 years ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆267Dec 23, 2023Updated 2 years ago
- Open source tools for computational pathology - Nature BME☆1,611Apr 14, 2025Updated 10 months ago
- cGAN-based Multi Organ Nuclei Segmentation☆195Jun 10, 2022Updated 3 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆142Aug 5, 2021Updated 4 years ago
- ☆77Dec 16, 2024Updated last year
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆688Oct 27, 2023Updated 2 years ago
- Pathologist-level interpretable whole-slide cancer diagnosis with deep learning☆131Jun 25, 2019Updated 6 years ago
- QuPath - Open-source bioimage analysis for research☆1,294Updated this week
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Jun 20, 2023Updated 2 years ago
- This is the source code for training and testing our three class CNN algorithm for generalized nuclei segmentation (IEEE TMI paper) using…☆54Jan 27, 2020Updated 6 years ago
- Python bindings to OpenSlide☆418Updated this week
- The solution to cameyon16 and camelyon17 challenge and also to your own WSI data project.☆317Aug 1, 2025Updated 7 months ago
- HistoQC is an open-source quality control tool for digital pathology slides☆318Dec 10, 2025Updated 2 months ago
- Implementation of Attention-based Deep Multiple Instance Learning in PyTorch☆977Jan 8, 2024Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆90Feb 19, 2026Updated last week
- Python Whole Slide Image Preprocessing☆298Nov 15, 2022Updated 3 years ago
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆44Jul 22, 2021Updated 4 years ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆134Updated this week