baccuslab / pyretLinks
Python tools for analysis of neurophysiology data
☆37Updated 2 years ago
Alternatives and similar repositories for pyret
Users that are interested in pyret are comparing it to the libraries listed below
Sorting:
- Tools for spike data analysis and visualization☆108Updated 2 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆96Updated 3 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 2 months ago
- Recordings of 10k neurons during spontaneous behaviors☆54Updated last year
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 7 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆71Updated 5 years ago
- YASS: Yet Another Spike Sorter☆70Updated 3 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆47Updated 6 years ago
- Python code for estimation of linear-nonlinear model parameters☆21Updated 4 years ago
- A class for using ML algorithms for spike prediction☆61Updated 7 years ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- An algorithm for unsupervised discovery of sequential structure☆169Updated last year
- Fast and customizable of extracellular recordings on MEA☆45Updated 4 months ago
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆70Updated 2 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆50Updated 3 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 4 years ago
- Automatic spike sorting up to 64 channels☆53Updated 4 years ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 8 years ago
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆45Updated last month
- IBL core shared libraries☆63Updated this week
- Deconvolution of calcium imaging data☆101Updated 9 months ago
- Fast and scalable spike sorting in python☆95Updated 3 months ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- SpikeForest -- spike sorting analysis for website -- version 2☆34Updated 2 years ago
- non-parametric inference for convolutional filters in poisson glms☆13Updated 4 years ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- A Python application for visualizing, navigating, and spike sorting high-density multichannel neuronal extracellular waveform data☆24Updated 2 years ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago