Python tools for analysis of neurophysiology data
☆37Oct 2, 2023Updated 3 years ago
Alternatives and similar repositories for pyret
Users that are interested in pyret are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data and example scripts used in the paper `Inferring hidden structure in multilayered neural circuits`☆15Sep 11, 2021Updated 5 years ago
- ☆28Jun 22, 2024Updated 2 years ago
- Proximal algorithms and operators in python☆26May 11, 2019Updated 7 years ago
- Python code for estimation of linear-nonlinear model parameters☆23Apr 9, 2021Updated 5 years ago
- Tools for visualizing and comparing data from vertebrate retinas☆14Jan 20, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Accompanying code for Aljadeff et al., 'Analysis of Neuronal Spike Trains, Deconstructed', Neuron (2016)☆11Jul 25, 2016Updated 10 years ago
- Plugins for Phy2☆20May 13, 2025Updated last year
- Neuroelectrophysiology object model and data analysis in Python.☆50May 25, 2026Updated 4 months ago
- Python Bindings for Neuroshare☆16Aug 16, 2016Updated 10 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Jul 23, 2019Updated 7 years ago
- The Browsable Atlas of Behavior-Anatomy Maps (BABAM) is a GUI for exploring hypotheses of correlations between neural activity in regions…☆13May 17, 2023Updated 3 years ago
- Sparse coding (Olshausen & Field, 1996)☆14Aug 19, 2020Updated 6 years ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆20Nov 26, 2017Updated 8 years ago
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆48Jul 19, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- a Python machine learning library for neurophysiology data☆36Nov 10, 2018Updated 7 years ago
- [DEPRECATED] Python API for NWB < 2.0☆30Jun 19, 2017Updated 9 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆102Jul 18, 2022Updated 4 years ago
- Repository of code, data and CAD files associated with Luo*, Bondy* et al (2020). "An approach for long-term, multi-probe Neuropixels rec…☆12Jul 1, 2025Updated last year
- Some python functions to supplement the NEURON python module☆28Jun 25, 2019Updated 7 years ago
- non-parametric inference for convolutional filters in poisson glms☆13Sep 20, 2021Updated 5 years ago
- Dimensionality reduction of spikes trains☆49Oct 9, 2021Updated 5 years ago
- Visualize/test models for visual representation by synthesizing images.☆95Oct 2, 2026Updated last week
- Keras for Science☆73Jun 27, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Timeseries analysis for neuroscience data☆263Sep 1, 2026Updated last month
- Fast CPU implementations of several conditional probabilistic models☆37Oct 3, 2023Updated 3 years ago
- Metrics for spike sorting validation/quality control☆15Sep 8, 2021Updated 5 years ago
- Fast and scalable spike sorting in python☆100Jul 28, 2025Updated last year
- ☆10May 9, 2017Updated 9 years ago
- LaTeX manuscript template based on a Nature Neuroscience submission☆26Mar 9, 2021Updated 5 years ago
- 🔋 Utilities for scientific python☆19Oct 16, 2025Updated 11 months ago
- ImaGen: Generic Python library for 0D, 1D and 2D pattern distributions☆30Nov 29, 2020Updated 5 years ago
- ERAASR: An algorithm for removing electrical stimulation artifacts from multielectrode array recordings☆17May 9, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- 🕝 Time-warped principal components analysis (twPCA)☆127Apr 14, 2021Updated 5 years ago
- Tools for spike data analysis and visualization☆114Feb 4, 2023Updated 3 years ago
- Symphony Data Acquisition System☆20Oct 19, 2021Updated 4 years ago
- [DEPRECATED] Matlab API for NWB < 2.0☆11Jul 18, 2016Updated 10 years ago
- Event-Driven CD in Spiking Neural Networks☆20Mar 17, 2016Updated 10 years ago
- When do neural networks learn sequential vs. persistent solutions in short-term memory tasks?☆16Sep 12, 2019Updated 7 years ago
- Convert Intan (rhd or rhs) files to NWB file format☆10Oct 2, 2023Updated 3 years ago