Alternatives and similar repositories for spykes

Users that are interested in spykes are comparing it to the libraries listed below

• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆71Updated 5 years ago
• KordingLab / spykesML
  A class for using ML algorithms for spike prediction
  ☆61Updated 7 years ago
• pillowlab / GLMspiketraintutorial
  Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data
  ☆94Updated 3 years ago
• pillowlab / GLMspiketools
  Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
  ☆43Updated 6 years ago
• FeeLab / seqNMF
  An algorithm for unsupervised discovery of sequential structure
  ☆166Updated last year
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆70Updated 2 years ago
• lfads / lfads-run-manager
  Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)
  ☆50Updated 3 years ago
• baccuslab / pyret
  Python tools for analysis of neurophysiology data
  ☆37Updated last year
• frsong / pycog
  Train excitatory-inhibitory recurrent neural networks for cognitive tasks.
  ☆50Updated 9 years ago
• slinderman / pyglm
  Interpretable neural spike train models with fully-Bayesian inference algorithms
  ☆48Updated 7 years ago
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆52Updated last year
• mariomulansky / PySpike
  Python implementation of spike distance metrics
  ☆74Updated last year
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated 3 weeks ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆47Updated 5 years ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆34Updated last year
• voytekresearch / Tutorials
  Learn to do common Voytek Lab things.
  ☆85Updated 2 years ago
• catniplab / vlgp
  Dimensionality reduction of spikes trains
  ☆49Updated 3 years ago
• catniplab / NPGLM
  non-parametric inference for convolutional filters in poisson glms
  ☆13Updated 3 years ago
• flatironinstitute / mountainlab-js
  MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…
  ☆44Updated 6 years ago
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆119Updated last year
• PeyracheLab / StarterPack
  Tutorial
  ☆11Updated 4 years ago
• gamaleldin / TME
  This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …
  ☆18Updated 7 years ago
• AllenInstitute / neuroglia
  a Python machine learning library for neurophysiology data
  ☆36Updated 6 years ago
• NeuralEnsemble / elephant
  Elephant is the Electrophysiology Analysis Toolkit
  ☆220Updated 5 months ago
• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆60Updated 4 years ago
• PhABC / neuroSummerSchools
  List of summer schools in neuroscience and related fields
  ☆223Updated 6 years ago
• voytekresearch / pacpy
  Calculate phase-amplitude coupling in Python (and Matlab).
  ☆25Updated 7 years ago
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆98Updated 7 months ago
• xjwanglab / book
  ☆27Updated 3 weeks ago