pillowlab / LNPfittingLinks
Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood
☆18Updated 7 years ago
Alternatives and similar repositories for LNPfitting
Users that are interested in LNPfitting are comparing it to the libraries listed below
Sorting:
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆40Updated 5 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- Python tools for analysis of neurophysiology data☆37Updated last year
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆67Updated last year
- Codebase for Cross-Spectral Factor Analysis (Gallagher et al., 2017)☆14Updated 4 years ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 7 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆94Updated 2 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆70Updated 5 years ago
- non-parametric inference for convolutional filters in poisson glms☆13Updated 3 years ago
- Functions to assess quality of spike sorting results☆34Updated last year
- ☆54Updated 3 months ago
- Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)☆12Updated 10 years ago
- Recordings of 10k neurons during spontaneous behaviors☆52Updated last year
- YASS: Yet Another Spike Sorter☆67Updated 2 years ago
- ☆9Updated 5 years ago
- Neuropixels case for chronic recordings in freely moving mice.☆18Updated 5 years ago
- Coding exercises for Neural Data Science at CSHL in 2019☆29Updated 5 years ago
- Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.☆20Updated 7 years ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆53Updated 3 months ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆35Updated last year
- ☆23Updated 5 years ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 3 months ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆49Updated 3 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- ☆28Updated 11 months ago
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- JRCLUST☆35Updated last year
- SpikeForest -- spike sorting analysis for website☆16Updated 4 years ago