Alternatives and similar repositories for lfads-run-manager:

Users that are interested in lfads-run-manager are comparing it to the libraries listed below

• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆45Updated 5 years ago
• pillowlab / GLMspiketraintutorial_python
  ☆49Updated 2 years ago
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆68Updated 4 years ago
• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆59Updated 3 years ago
• gamaleldin / TME
  This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …
  ☆18Updated 7 years ago
• nicholas-roy / psytrack
  ☆50Updated last month
• bantin / jPCA
  jPCA for Neural Data Analysis in Python
  ☆47Updated last year
• catniplab / NPGLM
  non-parametric inference for convolutional filters in poisson glms
  ☆13Updated 3 years ago
• pillowlab / GLMspiketools
  Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
  ☆37Updated 5 years ago
• murthylab / GLMHMM
  ☆23Updated 5 years ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆49Updated last month
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆48Updated 6 months ago
• rajanlab / CURBD
  Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)
  ☆52Updated 4 years ago
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆35Updated 5 years ago
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆66Updated 2 years ago
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆33Updated last year
• KordingLab / spykes
  Tools for spike data analysis and visualization
  ☆104Updated 2 years ago
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆50Updated last year
• fmastrogiuseppe / LowRank
  Supplementary code for the paper "Linking connectivity, dynamics and computations in low-rank recurrent neural networks" by F. Mastrogius…
  ☆34Updated 6 years ago
• catniplab / vlgp
  Dimensionality reduction of spikes trains
  ☆49Updated 3 years ago
• themattinthehatt / behavenet
  Toolbox for analyzing behavioral videos and neural activity
  ☆59Updated last year
• NeurodataWithoutBorders / matnwb
  A Matlab interface for reading and writing NWB files
  ☆52Updated 2 weeks ago
• egokcen / DLAG
  A dimensionality reduction framework for disentangling the flow of signals between populations of neurons
  ☆29Updated 2 years ago
• pillowlab / GLMspiketraintutorial
  Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data
  ☆93Updated 2 years ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• cajal / pipeline
  Schemata and libraries for neuroscientific data
  ☆23Updated 5 months ago
• NII-Kobayashi / GLMCC
  GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)
  ☆35Updated 2 years ago
• mackelab / smc_rnns
  Code accompanying Inferring stochastic low-rank RNNs from neural data. @matthijspals
  ☆19Updated this week
• karthikcl2590 / NeuralTraj
  Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.
  ☆20Updated 7 years ago