Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)
☆52Dec 17, 2021Updated 4 years ago
Alternatives and similar repositories for lfads-run-manager
Users that are interested in lfads-run-manager are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)☆325Jul 29, 2026Updated 3 months ago
- Extracting neuronal functional network dynamics via adaptive Granger causality analysis☆19Mar 29, 2018Updated 8 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Jul 23, 2019Updated 7 years ago
- Models and examples built with TensorFlow☆15Jan 5, 2021Updated 5 years ago
- Easy plotting for spiking raster/psths, and other event-aligned averages☆10Feb 1, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆20Nov 26, 2017Updated 8 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆72May 12, 2020Updated 6 years ago
- Fast approximate inference for Poisson GLMs☆11Oct 20, 2019Updated 7 years ago
- A spike raster plot from spike time stamps with optional trial and group data.☆12Nov 15, 2024Updated last year
- Centered Dirichlet Mixture entropy estimator for binary data☆10Jan 13, 2015Updated 11 years ago
- Zenith of Event-based Time-locked Anomalies☆15Feb 26, 2024Updated 2 years ago
- Neuropixels case for chronic recordings in freely moving mice.☆19Dec 3, 2019Updated 6 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆52Sep 27, 2019Updated 7 years ago
- Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)☆12Jan 14, 2015Updated 11 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆102Jul 18, 2022Updated 4 years ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Aug 20, 2026Updated 2 months ago
- MATLAB toolbox for spike-train community detection☆16Feb 12, 2024Updated 2 years ago
- Examples of using MountainSort spike sorting software.☆29Jun 18, 2019Updated 7 years ago
- Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.☆22Jul 30, 2017Updated 9 years ago
- Exercises and examples for the latent dynamics workshop☆20Jul 16, 2026Updated 3 months ago
- ☆18Mar 27, 2021Updated 5 years ago
- MATLAB code for local field potential analysis☆21Aug 5, 2022Updated 4 years ago
- Codepack accompanying "Learning by neural reassociation," Nature Neuroscience, 2018.☆21May 15, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆13Nov 3, 2021Updated 4 years ago
- FixedPointFinder: A Tensorflow toolbox for identifying and characterizing fixed points in recurrent neural networks☆108Jul 30, 2024Updated 2 years ago
- a visualization method for neural data☆256Apr 4, 2025Updated last year
- Information about Neuropixels electrode arrays☆98Oct 22, 2026Updated last week
- Analysis code for the results of the spikefinder challenge☆12Feb 19, 2018Updated 8 years ago
- Open source rodent behavior measurement and control☆19Jul 5, 2017Updated 9 years ago
- P-sort is an open-source, Python-based, cross-platform software with an intuitive GUI. It has been designed to address the challenges of …☆11Jan 23, 2024Updated 2 years ago
- Understanding computation in artificial and biological recurrent networks through the lens of dynamical systems.☆393May 28, 2021Updated 5 years ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Sep 9, 2017Updated 9 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Parameter-free statistical testing package☆12Jul 7, 2026Updated 3 months ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Apr 24, 2023Updated 3 years ago
- Pytorch implementation of lfads, and hierarchical extension☆26Dec 2, 2021Updated 4 years ago
- ☆18Apr 19, 2024Updated 2 years ago
- Open-source software for intracranial electrode localization and visualization☆36Feb 2, 2026Updated 9 months ago
- interactive analysis of calcium imaging data from larval zebrafish☆136Jun 6, 2019Updated 7 years ago
- MatLab code for Srpinger book 'Advanced Data Analysis in Neuroscience'☆23May 20, 2018Updated 8 years ago