petteriTeikari / twoPhotonVessels
Analysis for 2-PM vasculature
☆9Updated 9 years ago
Related projects: ⓘ
- Reconstruction and image processing of micro-CT/nano-CT data taken at SPring-8 and APS Argonne.☆13Updated 3 months ago
- Codes for 3D Deconvolution of Microscopy Images☆26Updated 6 years ago
- Interactive registration tool for 3D medical datasets☆32Updated 3 months ago
- Ranking Operator Response of Path Openings☆26Updated 10 months ago
- Composed Directly Manipulated Free Form Deformation Image Registration☆26Updated 4 years ago
- ☆14Updated 7 years ago
- GPU-based Total (Generalized) Variation implementation for various applications, with Python and Matlab wrappers.☆53Updated 5 years ago
- Split Bregman spatiotemporal total variation for MRI☆12Updated 6 years ago
- The set of CPU/GPU optimised regularisation modules for iterative image reconstruction and other image processing tasks☆49Updated last week
- TVReg, Version 1.1: Software for 3D Total Variation Regularization☆27Updated 3 years ago
- Matlab implementation of continuous max flow variants☆20Updated 7 years ago
- A MATLAB library/toolbox providing access to image registration suitable for use with medical images.☆95Updated 8 years ago
- Constrained total variation image reconstruction problem solved using the Split Bregman formulation where the Jacobian is provided as a m…☆12Updated 8 years ago
- Mirorr: Multimodal Image Registration using blOck-matching and Robust Regression☆27Updated 3 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆26Updated 6 years ago
- Source code for the paper "Multi-dimensional Sparse Super-resolution"☆16Updated 6 years ago
- Python notebooks and data for learning about image registration. Hosted at a summer school☆9Updated 6 years ago
- The reference implementation for the Non Local Spatial and Angular Matching (NLSAM) denoising algorithm for diffusion MRI☆24Updated last month
- Jerman's tubular (vessel) and spherical (blob) enhancement filters☆61Updated 5 years ago
- MATLAB Elastix wrapper☆26Updated 3 months ago
- Level Set Methods for image segmentation☆28Updated 10 years ago
- Source code for 4D model-based iterative reconstruction of tomographic data☆13Updated 6 years ago
- MATLAB code to calculate the 3D skeleton of a binary volume using parallel medial axis thinning☆43Updated 5 years ago
- Java (ImageJ/Fiji) software package for 3D deconvolution microscopy☆47Updated 5 years ago
- MICCAI 2017 Paper - Optimal Transport for Diffeomorphic Registration☆51Updated 5 years ago
- A collection of tomographic tools for CT reconstruction in MATLAB☆9Updated 6 years ago
- This is the companion software for the paper "Total Directional Variation for video denoising".☆13Updated 5 years ago
- A tool for the visual analysis and processing of volumetric datasets, with a focus on industrial computed tomography.☆41Updated last week
- MATLAB code for an iterative reconstruction method that alternates a computationally efficient linear solver (ART) with a fast denoising …☆19Updated 7 years ago
- A toolbox to illustrate the use of CUDA together with Matlab.☆9Updated 7 years ago