HMC and other derivative-based MCMC sampling algorithms for the nimble package
☆13Dec 15, 2025Updated 3 months ago
Alternatives and similar repositories for nimbleHMC
Users that are interested in nimbleHMC are comparing it to the libraries listed below
Sorting:
- Fit stochastic differential equation models with time-varying parameters☆15Jan 21, 2026Updated 2 months ago
- Reproducible Bayesian data analysis pipelines with targets and JAGS☆11Dec 3, 2024Updated last year
- Uniform sampling on various geometric shapes☆10Jul 18, 2023Updated 2 years ago
- maple: Model averaged projections of life expectancy☆16Jul 13, 2019Updated 6 years ago
- iSDM is an open-source R package that implements a few functions useful for modeling the spatial distribution of invasive species☆17Jan 12, 2023Updated 3 years ago
- Bayesian Data Analysis in Ecology with R, BUGS, and Stan☆17Feb 10, 2026Updated last month
- The base NIMBLE package for R☆191Feb 26, 2026Updated 3 weeks ago
- Morgan Ernest & Ethan White's Ecological Forecasting & Dynamics Course☆24Feb 6, 2026Updated last month
- Machine Learning algorithms coded from scratch☆22Dec 16, 2020Updated 5 years ago
- A 6 hour course on Stan with Dan Simpson, Vianey Leos-Barajas, and Andrew MacDonald☆19Jun 21, 2020Updated 5 years ago
- Templates for commonly used GitHub actions steps☆13Dec 13, 2024Updated last year
- Fit and compare the most popular human mortality laws - R package☆35Apr 15, 2025Updated 11 months ago
- primer R package for "A Primer of Ecology with R"☆15Aug 27, 2021Updated 4 years ago
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 3 years ago
- SSNbayes: An R package for Bayesian spatial and spatio-temporal analysis in stream network☆20Jul 25, 2025Updated 7 months ago
- Gaussian processes with spherical harmonic features in JAX☆15Aug 24, 2025Updated 6 months ago
- Spatial capture-recapture models in Stan☆25May 17, 2020Updated 5 years ago
- R package to Run JAGS (Just Another Gibbs Sampler) analyses from within R☆37Jan 29, 2026Updated last month
- Materials for the virtual NIMBLE workshop, May 26-28, 2021. For logistical information, please look below the file listing.☆14May 28, 2021Updated 4 years ago
- A minimal Diffusion Model build using only linear components☆28Sep 27, 2023Updated 2 years ago
- ☆21Feb 15, 2023Updated 3 years ago
- Fused Matrix Library☆24Jan 9, 2022Updated 4 years ago
- Code accompanying the paper 'Manifold MCMC methods for Bayesian inference in a wide class of diffusion models'☆10May 28, 2025Updated 9 months ago
- A simple markdown to website generator written in C++.☆46Mar 10, 2026Updated last week
- Quarto extension for a masters or PhD thesis☆70Mar 31, 2024Updated last year
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Nov 11, 2025Updated 4 months ago
- ☆10Sep 18, 2023Updated 2 years ago
- An R package for tidyverse-friendly causal inference☆10Aug 2, 2019Updated 6 years ago
- rmarkdown-xaringan-slides☆11Jun 2, 2023Updated 2 years ago
- Automatically update SUMMARY.md of a GitBook repo,default Based on the markdown title, not the article name,But if without a title, artic…☆11Jul 6, 2022Updated 3 years ago
- Examples from Kéry & Royle's "Applied Hierarchical Modeling in Ecology (Volume I)" converted to NIMBLE☆30Jun 21, 2018Updated 7 years ago
- Repo for code for "Unrepresentative Surveys Significantly Overestimate Vaccine Uptake in the US"☆15Dec 18, 2021Updated 4 years ago
- Self-tuning HMC algorithms and evaluations☆19Oct 10, 2024Updated last year
- Notebooks and data for StanCon2023 tutorial on BRMS☆17Jun 27, 2023Updated 2 years ago
- ☆10Apr 24, 2020Updated 5 years ago
- ☆10Jul 21, 2024Updated last year
- Stand alone markdowns with embedded shiny apps for various eco&epi models☆25Jan 29, 2026Updated last month
- Steve's {ggplot2} themes and related theme elements☆12Apr 27, 2023Updated 2 years ago
- Code for the paper "Neural hierarchical models of ecological populations"☆32Nov 6, 2022Updated 3 years ago